Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02795 ATGGTTGCATTCTGCCCACCTCAGTTCTCATACTCAAACATGGGATGGCTCTTAGAGGAGTTAGAGCCAGAGTCCTTAATTAATCATAAAGAGAAGAACTATGCATCTTTAGAGTACTCGTTACCTTATCATCAATTCTCTTCACCAAAGGAACATGTTGAAATTGAAAGGCCACCATCCCCTAAACTTATGGCCAAGAAGCTTAACCACAATGCTAGTGAACGTGATCGTCGCAAGAAGATTAATAGCTTGATTTCTTCACTTCGTTCACTTCTTCCCGGTGAAGATCAAACGAAAAAAATGAGCATTCCAGTAACAATTTCACGTGTCTTAAAATACATACCGCATTTACAAAAGCAAGTGCAAGGACTAACTAAGAAAAAAGAAGAGCTTCTATCAAGAATTTCTCGACAAGAATATGCAGTTAACAAAGAATCACAAAGGAAGAAAATTCCAAATTACAATTCTTCTTTTGAAGTTTCAACAAGTAGACTTAATGATACTGAGCTTGTTATTCATATTTCATCTTATGAGACCTACAAGATTCCTCTATCTGAGATCTTGATGTGTTTAGAAAATAATGGTCTTCTTCTACTAAACTCTTCTTCTTCTAAAACCTTTGGAGGGAGGCTCTTCTATAACTTGCATTTTCAGGTGGATAAAACTCAAAGATATGAGTGTGATGATCTGATTCAAAAGCTTTCTTCAATATATGAGAAGCAGCAAAATAATCATTTGGGCACTATGGATCAAACGATCAATAGTGTTCTGATATATTAA 780 0.3551 MVAFCPPQFSYSNMGWLLEELEPESLINHKEKNYASLEYSLPYHQFSSPKEHVEIERPPSPKLMAKKLNHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPHLQKQVQGLTKKKEELLSRISRQEYAVNKESQRKKIPNYNSSFEVSTSRLNDTELVIHISSYETYKIPLSEILMCLENNGLLLLNSSSSKTFGGRLFYNLHFQVDKTQRYECDDLIQKLSSIYEKQQNNHLGTMDQTINSVLIY 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02795 259 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 66 137 IPR036638 GO:0046983
Mepo3g02795 259 Gene3D - 60 150 IPR036638 GO:0046983
Mepo3g02795 259 SMART finulus 71 123 IPR011598 GO:0046983
Mepo3g02795 259 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 65 117 IPR011598 GO:0046983
Mepo3g02795 259 Pfam Helix-loop-helix DNA-binding domain 66 118 IPR011598 GO:0046983
Mepo3g02795 259 Coils Coil 114 134 - -
Mepo3g02795 259 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 62 236 - -
Mepo3g02795 259 FunFam Transcription factor ORG2 61 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02795 Mepo-Chr3 37891266 37892981 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02795 1 243 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 41.634 8.82e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo3g02795 HLH 2.7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02795 - - psat:127129084 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02795 3 37891266 37892981 Mepo3g02795 3 37891266 37892981 ECH