Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02794 ATGGTTGCATTCTGCCCACCTCAGTTCTCATACTCAAACATGGGATGGCTCTTAGAGGAGTTAGAGCCAGAGTCCTTAATTAATCATAAAGAGAAGAACTATGCATCTTTAGAGTACTCGTTACCTTATCATCAATTCTCTTCACCAAAGGAACATGTTGAAATTGAAAGGCCACCATCCCCTAAACTTATGGCCAAGAAGCTTAACCACAATGCTAGTGAACGTGATCGTCGCAAGAAGATTAATAGCTTGATTTCTTCACTTCGTTCACTTCTTCCCGGTGAAGATCAAACGGTAGAAGGGCTAACTAAGAAAAAAGAAAAGCTTCTATCAAGAATTTCTAGGCAAGAATATGAAGTGACCAAAGAATCACAAAGGAAAATTCCCAATTACCACAATTCCTCTTTTGAAGTTTCAACAAGTAGGCTTAATGATACTGAGCTTGTTATTCATGTTTCTTTTTATGAGACCTACAAGATTCCTCTATCTGAGATCTTGATGTGTTTAGAAAATAATGGTCTTCTTCTACTAAACTCTTCTTCTTCTAAAACCTTTGGAGGGAGGCTCTTCTATAACTTGCATTTCCAGGTGGATAAAACTCAAAGATATGAGTGTGATGATTTGATTCAAAAGCTTTCTTCAATATATGAGAAGAAGCAAAGTAATCATCTAATGTTGGGAGCTTACGATCAAACGATCAGTAGTGTTCTGATATATTGA 720 0.3681 MVAFCPPQFSYSNMGWLLEELEPESLINHKEKNYASLEYSLPYHQFSSPKEHVEIERPPSPKLMAKKLNHNASERDRRKKINSLISSLRSLLPGEDQTVEGLTKKKEKLLSRISRQEYEVTKESQRKIPNYHNSSFEVSTSRLNDTELVIHVSFYETYKIPLSEILMCLENNGLLLLNSSSSKTFGGRLFYNLHFQVDKTQRYECDDLIQKLSSIYEKKQSNHLMLGAYDQTISSVLIY 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02794 239 Coils Coil 99 119 - -
Mepo3g02794 239 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 66 96 IPR036638 GO:0046983
Mepo3g02794 239 Gene3D - 61 126 IPR036638 GO:0046983
Mepo3g02794 239 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 62 96 - -
Mepo3g02794 239 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 65 119 IPR011598 GO:0046983
Mepo3g02794 239 Pfam Helix-loop-helix DNA-binding domain 66 101 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02794 Mepo-Chr3 37880200 37881775 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02794 1 218 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 35.433 5.96e-34 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo3g02794 HLH 1.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02794 - - psat:127129084 329.717