Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02782 ATGGGAATGGCAGCAGAGTCACAGTTTCATGTTTTGGCTGTTGATGACAGCATCATAGATAGGAAGCTTATTGAGAGGCTTCTTAAAACCTCTTCATATCAAGTTACTACAGTTGATTCTGGTAGCAAGGCTTTAGAGTTTTTGGGTTTATGTGAGAATGATGAGACCAACCCAAATACACCATCTGTATTTCCTAACAATCATCAGGAAGTGGAAGTGAATCTTGTTATAACAGATTACTGTATGCCTGGCATGACAGGCTATGATTTGCTTAAGAAAATCAAGGAATCATCATCATTGAGAAACATACCAGTGGTGATTATGTCATCTGAGAATGTACCTTCAAGGATTAATAGATGCTTGGAGGAAGGAGCAGAAGAATTTTTCTTGAAGCCTGTTAGGTTATCAGATTTAAACAGACTTAAACCTCACATGAAGAAAACCAAATTGAAAGATCCAAATCAAGAAACAGAACAAAAGATTGAAAATTCAGAAATTCTTGAAAATGAACAACAGCATCAAGCATCAAAATCTCAACATTCACATTTAGAGTCAGAGTCACAGACACAGACACAGTTACAAACACATTCAACTATAGATCAACAGCAACAATCACTACAACAAGCAACCAATAACAAGAGAAAGAGTGTGGAACAAAGTCTTTCATCTGAGACTGACAGAACAAGACCAAGATACAGTGGCATTGCTACTGTTGTATGA 720 0.3681 MGMAAESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLCENDETNPNTPSVFPNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLSDLNRLKPHMKKTKLKDPNQETEQKIENSEILENEQQHQASKSQHSHLESESQTQTQLQTHSTIDQQQQSLQQATNNKRKSVEQSLSSETDRTRPRYSGIATVV 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02782 239 CDD REC_typeA_ARR 11 141 - -
Mepo3g02782 239 MobiDBLite consensus disorder prediction 169 239 - -
Mepo3g02782 239 Coils Coil 199 219 - -
Mepo3g02782 239 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 217 IPR045279 GO:0009736
Mepo3g02782 239 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Mepo3g02782 239 Gene3D - 10 232 - -
Mepo3g02782 239 SUPERFAMILY CheY-like 8 147 IPR011006 -
Mepo3g02782 239 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
Mepo3g02782 239 Coils Coil 154 174 - -
Mepo3g02782 239 MobiDBLite consensus disorder prediction 181 218 - -
Mepo3g02782 239 SMART REC_2 9 142 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02782 Mepo-Chr3 37754698 37757465 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02782 1 239 Response Regulator Gene Family AT3G57040 64.198 5.31e-101 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo3g02782 Response_reg 1e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02782 K14492 - gmx:100814494 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02782 3 37754698 37757465 Mepo3g02782 3 37754698 37757465 ECH