Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02767 ATGTCCCTTGAAGACTCACTAAGATCTCTTTCTTTAGATTACTTAAACCTTCTCATCAACGGACAAGCGTTCAGCGACGTTGTTTTCAGCGTCGAAGGACGTTTAGTCCACGCACACAGATGCATCTTGGCAGCAAGAAGTCTCTTCTTCAGAAAATTCTTTTGTGGGCCAGACCCACCTTCTGGATTAGACCCATCAGAAAACCGAGTCAACCCATCCGGTTCAGCTAGGTCTGGTGTTATACCTGTTAACTCAGTTGGTTATGAGGTTTTCTTGTTGATGCTTCAGTTTCTGTACAGTGGACAAGTTTCTATTGTTCCTCAGAAACATGAACCTAGGCCTAATTGTGGTGACCGTGGTTGTTGGCATACACATTGTACCTCAGCCGTTGATCTTGCTCTTGATACTCTTGCAGCCGCTAGATACTTTGGAGTTGAACAGCTTGCATTGCTCACTCAGAAACAACTAGCGAGCATGGTGGAAAAAGCCTCGATTGAAGATGTAATGAAAGTGCTCCTAGCATCAAGAAAACAAGACATGCACCAACTATGGACCACATGTTCCCATCTTGTAGCAAAATCCGGTCTTCCCCCAGAAGTACTTGCAAAACACCTCCCTATTGATATCATAGCCAAAATCGAAGAGCTTCGCATCAAAACCTCCTTATCACGCCGCTCCTTAATGCCTCATCACCACCATCCTCACCATCACGACCATCTCACCGCGGCAGCTGACCTTGAAGACCAGAAAATCCGTCGGATGAGACGAGCCCTCGACTCCTCAGATGTCGAGCTAGTGAAACTCATGGTAATGGGAGAAGGCCTAAACCTTGATGAAGCATTAGCATTACCTTATGCCGTTGAGAATTGCAGTAGAGAAGTGGTGAAAGCCTTATTGGAACTCGGTGCAGCCGATGTTAACTTCCCGGCTGGTCCAACTGGTAAAACTCCGCTACATATTGCAGCGGAGATGGTCTCACCGGATATGGTGGCTGTTTTGCTCGACCACCACGCTGACCCGAATGTGAGGACAGTTGATGGTGTTACACCATTGGACATTCTAAGAACCCTAACTTCGGATTTTCTATTCAAAGGTGCTGTCCCTGGATTAACTCACATAGAACCAAACAAACTAAGGTTGTGTTTGGAACTTGTTCAATCTGCAGCTCTTGTTATGTCAAGGGAAGAAGGAAATAACAACAATAGTAATAATAATAATGCTACACCTTCTTCAGCAACAAATATGTATCCTCGTCATAATATGAATGAAGATCACCACCATAGCCACAACAACAATAACATGGATTCAAGGTTGGTGTATCTTAACCTTGGTGCTAATACTCAAATGAGTACTTCCAGGTTGGATTCTGGTGATGATGATAATAGTCACAGGGAAGCTATCAACAACTCCATGTATCATCATCACTCTCATGGTCATGACTACTAA 1446 0.4433 MSLEDSLRSLSLDYLNLLINGQAFSDVVFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPSENRVNPSGSARSGVIPVNSVGYEVFLLMLQFLYSGQVSIVPQKHEPRPNCGDRGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQLASMVEKASIEDVMKVLLASRKQDMHQLWTTCSHLVAKSGLPPEVLAKHLPIDIIAKIEELRIKTSLSRRSLMPHHHHPHHHDHLTAAADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDEALALPYAVENCSREVVKALLELGAADVNFPAGPTGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVMSREEGNNNNSNNNNATPSSATNMYPRHNMNEDHHHSHNNNNMDSRLVYLNLGANTQMSTSRLDSGDDDNSHREAINNSMYHHHSHGHDY 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02767 481 MobiDBLite consensus disorder prediction 449 481 - -
Mepo3g02767 481 CDD BTB_POZ_NPR_plant 8 160 - -
Mepo3g02767 481 Pfam Ankyrin repeats (3 copies) 261 343 IPR002110 GO:0005515
Mepo3g02767 481 Pfam Domain of unknown function (DUF3420) 195 255 IPR024228 -
Mepo3g02767 481 MobiDBLite consensus disorder prediction 395 418 - -
Mepo3g02767 481 FunFam regulatory protein NPR5 isoform X2 244 361 - -
Mepo3g02767 481 SMART BTB_4 25 160 IPR000210 GO:0005515
Mepo3g02767 481 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 1 473 IPR044284 GO:0099402
Mepo3g02767 481 MobiDBLite consensus disorder prediction 395 433 - -
Mepo3g02767 481 FunFam regulatory protein NPR5 isoform X1 4 193 - -
Mepo3g02767 481 Gene3D Potassium Channel Kv1.1; Chain A 4 193 IPR011333 -
Mepo3g02767 481 ProSiteProfiles Ankyrin repeat profile. 313 345 IPR002110 GO:0005515
Mepo3g02767 481 ProSiteProfiles Ankyrin repeat region circular profile. 313 343 - -
Mepo3g02767 481 Pfam BTB/POZ domain 16 110 IPR000210 GO:0005515
Mepo3g02767 481 SUPERFAMILY POZ domain 8 158 IPR011333 -
Mepo3g02767 481 SUPERFAMILY Ankyrin repeat 272 356 IPR036770 -
Mepo3g02767 481 SMART ANK_2a 313 342 IPR002110 GO:0005515
Mepo3g02767 481 SMART ANK_2a 278 308 IPR002110 GO:0005515
Mepo3g02767 481 MobiDBLite consensus disorder prediction 456 481 - -
Mepo3g02767 481 Gene3D - 238 361 IPR036770 -
Mepo3g02767 481 ProSiteProfiles BTB domain profile. 25 107 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02767 Mepo-Chr3 37599453 37602976 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mepo3g02767 BTB 1.3e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02767 K14508 - gmx:100816086 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02767 3 37599453 37602976 Mepo3g02767 3 37599453 37602976 ECH
Mepo3g02767 3 37599453 37602976 Mepo4g00100 4 2213460 2217280 PCT