Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02744 ATGCCTTACCTCATCCGGGAGAACCTATTCATCAGCAATATCGTTGACGCCGCCGAAATTCTCCAAGCCACCACCACCACTGTCCCCCACAACATCACCCACATCCTCTCCGTTCTCAGCTCCGCTTCCATCTCTTTCTTCTCCGAATGGCGTTCTTCCTTCTCTGTCCCTGTCAAAGAGATCTCCAAACTCCACGTCTCCGACCTTCCTACTGCTGCCAAGTCCGCTCTCTCACCGGACAAGCTTCTGTACTCTTTGGAATACGCCGGGGAAGATTTTAAGCTTGTGAGGATGGCTGTTCCGCTAAGGGATACTGAGAGTGAGAATTTGTTGGATTATCTTGAAGTTTGTGTTGATTTTATTGAGAGGAGTAGGAAAGATGGTTCTGTTTTGGTTCATTGTTTCGCCGGTGTTTCTAGAAGTGCAGCGGTTATTACGGCCTATTTGATGAAAAGCGAAAATTTGTCACTAGAAGATGCCCTTGCATCGTTAAAGCAGAGCTGTGAATTTGTTTGCCCCAATGATGGCTTTCTAGAGCAGTTGAAAATGTTTGAGGAGATGGGTTTCAAGGTTGATCAGTCTAGCCCTGTATACAAGCGCTTTCGTCTAAAAATACTAGGTGAGAATCATTTCTCAGGGTCGAGGATAGACAGTTCTAAGCTTGGTGCAGATCCTGGCATGCCTGTTGAAACTTCTTCAGAGGTGGGAGAAGCTACTAAAGTAGAAAATAATCCTAGTCCTACATATCGCTGTAAGAAGTGCCGTCGTATTGTTGCATTGCAAGAACATGTCGTAGATCATATTCCTGGGGAGGGTGAGACATCCTTTGGCTGGCACAAGCGGAAAAGTGGCAATCCTTTTAACAAGTCTAATGAATCTGAGTGTTCGTCTATATTTATTGAGCCTCTACGGTGGATGAAAGATGTTGAGGAAGGTGCGTTGGAGGGAAAACTGTCCTGTGCTCATTGTGATGCCCGTTTGGGATACTTCAATTGGGCAGGCATACAATGCAGCTGTGGAAGCTGGATAACACCAGCTTTTCAACTACACAAAAGTCGGGTAGATATAAGCCCCGTGTAA 1080 0.4583 MPYLIRENLFISNIVDAAEILQATTTTVPHNITHILSVLSSASISFFSEWRSSFSVPVKEISKLHVSDLPTAAKSALSPDKLLYSLEYAGEDFKLVRMAVPLRDTESENLLDYLEVCVDFIERSRKDGSVLVHCFAGVSRSAAVITAYLMKSENLSLEDALASLKQSCEFVCPNDGFLEQLKMFEEMGFKVDQSSPVYKRFRLKILGENHFSGSRIDSSKLGADPGMPVETSSEVGEATKVENNPSPTYRCKKCRRIVALQEHVVDHIPGEGETSFGWHKRKSGNPFNKSNESECSSIFIEPLRWMKDVEEGALEGKLSCAHCDARLGYFNWAGIQCSCGSWITPAFQLHKSRVDISPV 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02744 359 Pfam Dual specificity phosphatase, catalytic domain 97 186 IPR000340 GO:0008138|GO:0016311
Mepo3g02744 359 ProSitePatterns Tyrosine specific protein phosphatases active site. 132 142 IPR016130 GO:0016311|GO:0016791
Mepo3g02744 359 MobiDBLite consensus disorder prediction 221 242 - -
Mepo3g02744 359 FunFam Dual specificity protein phosphatase 12-like 4 207 - -
Mepo3g02744 359 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 4 190 IPR029021 -
Mepo3g02744 359 Gene3D Protein tyrosine phosphatase superfamily 4 207 IPR029021 -
Mepo3g02744 359 SMART dsp_5 1 187 IPR020422 GO:0006470|GO:0008138
Mepo3g02744 359 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 111 166 IPR000387 GO:0016311|GO:0016791
Mepo3g02744 359 ProSiteProfiles Dual specificity protein phosphatase domain profile. 1 190 IPR020422 GO:0006470|GO:0008138
Mepo3g02744 359 CDD DSP_DUSP12 4 192 - -
Mepo3g02744 359 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 1 355 - -
Mepo3g02744 359 PIRSF DUSP12 83 359 IPR016278 GO:0006470|GO:0008138
Mepo3g02744 359 PIRSF DUSP12 3 56 IPR016278 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02744 Mepo-Chr3 37336554 37341475 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02744 91 186 Protein tyrosine phosphatase (PTP) family AT3G06110 35.052 5.32e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02744 K14819 - gmx:100776877 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02744 3 37336554 37341475 Mepo3g02744 3 37336554 37341475 ECH