Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02742 ATGGGCGAAAGCCTGACGGAGCAATGCCGCACCAGCGGATCTGGTGGTCGACAATCGTTCGGACTTGGTAAAGGTTTGTCACTGCAACGCAACCGTGGGAATTCAATGGAGTATGGCTATGCTCATCAGAATCTACAAAGCATGAAGGATGCATTAGCATTTGTAAAGGGTTTAGAAGTTGAGTTTGAAGACAAGGGGGATAAGTATGATGAGTTTCTAAATGTGATGAACGATTTCAAGAGTCTAAGAATTGATGCAGAAGGTGCCAAAGCAACACTAGAGGAGCTGTTTAAAGAGCATAGGCATTTAATTATGAGATTCAACTCCTTAACACTAAAGGGATCTCAGATCACTAAGCATGGTTATGAGGCTGAAGAGGAAGAAGACATGGAAATACTTGACAAACTTGAGAAACTAGAGTCAGCACTTGAACTTATTTTAGAAGTTTTGATGATCAAGAAGAAGGAAGCATAG 474 0.4135 MGESLTEQCRTSGSGGRQSFGLGKGLSLQRNRGNSMEYGYAHQNLQSMKDALAFVKGLEVEFEDKGDKYDEFLNVMNDFKSLRIDAEGAKATLEELFKEHRHLIMRFNSLTLKGSQITKHGYEAEEEEDMEILDKLEKLESALELILEVLMIKKKEA 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02742 157 Coils Coil 79 99 - -
Mepo3g02742 157 ProSiteProfiles PAH domain profile. 41 114 IPR003822 GO:0006355
Mepo3g02742 157 SUPERFAMILY PAH2 domain 47 109 IPR036600 GO:0006355
Mepo3g02742 157 Gene3D Paired amphipathic helix 50 110 IPR036600 GO:0006355
Mepo3g02742 157 Pfam Paired amphipathic helix repeat 67 108 IPR003822 GO:0006355
Mepo3g02742 157 PANTHER SIN3B-RELATED 47 137 IPR039774 GO:0003714
Mepo3g02742 157 Coils Coil 122 142 - -
Mepo3g02742 157 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02742 Mepo-Chr3 37327129 37328893 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02742 2 137 WRKY Transcription Factor Family AT4G12020 33.793 1.58e-12 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo3g02742 PAH 2.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02742 K11644 - rcu:8270362 80.4925