Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02738 ATGCTTCAGCAACAAATTCAGAATAATATTGGAATGGAAAACAACTCAGAACTCTTTCAATTCCTTGTTGCTAACAACCCTTCATTTTTTGAATACTCAAGTAGCACTATGATGCAACAAAGTTTCTGCAGTTCTTCTGATAACAACAATAACTATTACCACCCCTTTGAAGTTTCTGAAATTACTGATACACCCTCTCAGCAAGATAGAGCTCTAGCTGCTTTGAAGAATCACAAGGAAGCTGAGAAGAGAAGAAGGGAAAGAATAAACTCTCACCTTGACCATCTTCGTACTCTTCTCCCTTGCAACTCCAAGACAGACAAGGCTTCACTTCTAGCAAAAGTAGTCGAACGTGTGAAAGAATTAAAGCAACAAACATCTCAAATCACACAACTCGAAACTGTTCCATCCGAAACCGATGAAATAACCGTCATATCTGCCGGCAGTGACATCTCCGGTGAAGGCAGACTCATATTCAAAGCTTCGTTATGCTGCGAGGATCGCTCCGACCTAATTCCCGACCTAATTGAAATCCTCAAGTCTCTTCACCTGAAAACTCTCAAAGCTGAAATGGCCACACTTGGTGGAAGAACACGTAACGTTCTTGTTGTTGCTGCTGAGAAAGAACATAATAGCATTGAATCTATTCATTTTCTTCAGAATTCCCTTAGGTCTTTGTTGGATAGGTCTAGTGGTTGTAATGATAGGTCGAAAAGGCGTCGAGGTTTGGATAGAAGAATGATGCCTTAA 750 0.4053 MLQQQIQNNIGMENNSELFQFLVANNPSFFEYSSSTMMQQSFCSSSDNNNNYYHPFEVSEITDTPSQQDRALAALKNHKEAEKRRRERINSHLDHLRTLLPCNSKTDKASLLAKVVERVKELKQQTSQITQLETVPSETDEITVISAGSDISGEGRLIFKASLCCEDRSDLIPDLIEILKSLHLKTLKAEMATLGGRTRNVLVVAAEKEHNSIESIHFLQNSLRSLLDRSSGCNDRSKRRRGLDRRMMP 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02738 249 MobiDBLite consensus disorder prediction 231 249 - -
Mepo3g02738 249 SMART finulus 79 128 IPR011598 GO:0046983
Mepo3g02738 249 MobiDBLite consensus disorder prediction 230 249 - -
Mepo3g02738 249 CDD bHLH_AtAIG1_like 68 146 - -
Mepo3g02738 249 PANTHER TRANSCRIPTION FACTOR BHLH30 43 242 IPR045847 GO:0003700|GO:0006355
Mepo3g02738 249 FunFam transcription factor bHLH30 68 131 - -
Mepo3g02738 249 Pfam Helix-loop-helix DNA-binding domain 77 122 IPR011598 GO:0046983
Mepo3g02738 249 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 77 133 IPR036638 GO:0046983
Mepo3g02738 249 Gene3D - 68 134 IPR036638 GO:0046983
Mepo3g02738 249 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 73 122 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02738 Mepo-Chr3 37274728 37276776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02738 18 231 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 61.644 8.01e-80 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo3g02738 HLH 6.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02738 - - gmx:100802566 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02738 3 37274728 37276776 Mepo3g02738 3 37274728 37276776 ECH