Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02725 ATGAAGTCAGGGTCACTTGATCAGTGGAGGAGTTACTTTCGTTCATCGAATTCGGATATTTTCGATATAATTGACCATGCAATTGTTGTTGCTGCTTCTGATTGTCCAAAGGAGTTTAAGTCTAGGAGAGATGGTATTGCTGAGAGGTTGTTTTCTGTTATGCTGAATCGTTGTAAGGGGTGTGAGAAGGTTGAATTGTCTGTGCCTGATGATGATAATGGTGATGAACTTTGCAAGAGAAGTTCTGTTAGAGAGGGTGCTAGCAAAGAGAGCAAGGTGGATTGCAGTAGGGAAGAAAATGGAGTGATGGATGCTAACCCTATTAGCAATTACAGCTTTGGAGAAGCTGAAGCTTTAACTGATGAACTTGAAGAGCAATCACAACTTGTTGCTGAGGTTACGAGGATTAAAGAGATTCTCAATAACCATGAAGATGAGTCTGACTCGGTGCTGTTTGAGTCTCTGAGGAGGCTTCAACTGATGCAACTCTGTGTCGATCTTCTGAAGTCAACTGAGATTGGAAAGGCTGTGAATCATCTGAGAAAGCATGGATCGAAGGATATCCGTCAACTAGCACGGACTCTCATAGATGGATGGAAAGAACTGGTCAATGCGTGGGTGAAGGCGACAACAACCACACCTGTTGCAGCTTCCGAAGAAGGCACACCGGACTCCAGAAATCCATCTGTTGTTGAAAATGAAGAAGAGGAAGAAGGAGGACTTCCATCACCTCCTTTGGACGAAGGGGCTTTCTTTGTTGCCCCAACCGGTACAATTGAACTGTCACAGTTCTTTGACGGCATGGATGATGATGGAAATATTCGAAAGAGTGCACCATTCAACAAGAACCGTGACAACGGAAGAAAACCAGCTCTTGGCTCTCAAACTAAGGACAAAAGGAATTTTCCGGCATCTAATGAAACAGCCGTCACTGCCAAGGACAACAAGAGTCAGCACATGAAGAAAAACGAGGCTGCAGTGAGGCATAATAAACCAATGGCTGCTGATACTGGCCGTGCAAGACCGCTAAACTCAAACATTCAGCGAAAAGCCAATGTAGAGCCGAAGATGCCGCTGAAAATCGAAAACAGTACTGTCCCTAAGAGGCCTCTGAATGCTCAGCAAGATAAGTCGAAGTGTTCAGATGATTCGGCTAAGCTCGAAGCCACTAAGCGGAGACTTCAAGAGAGTTATCAACAAGCTGAAAATGCCAAGAGGCAAAGGACAATACAAGTAATGGAAATAAATGATCTTCCAAAGCAAGGGTCTGTCCAACGGAATACACATTTCAAACCCGGAAATCACAATCGGCAATGGGGCAACGGTCGTAGATAG 1335 0.4457 MKSGSLDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCKGCEKVELSVPDDDNGDELCKRSSVREGASKESKVDCSREENGVMDANPISNYSFGEAEALTDELEEQSQLVAEVTRIKEILNNHEDESDSVLFESLRRLQLMQLCVDLLKSTEIGKAVNHLRKHGSKDIRQLARTLIDGWKELVNAWVKATTTTPVAASEEGTPDSRNPSVVENEEEEEGGLPSPPLDEGAFFVAPTGTIELSQFFDGMDDDGNIRKSAPFNKNRDNGRKPALGSQTKDKRNFPASNETAVTAKDNKSQHMKKNEAAVRHNKPMAADTGRARPLNSNIQRKANVEPKMPLKIENSTVPKRPLNAQQDKSKCSDDSAKLEATKRRLQESYQQAENAKRQRTIQVMEINDLPKQGSVQRNTHFKPGNHNRQWGNGRR 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02725 444 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 129 211 IPR035441 -
Mepo3g02725 444 CDD TFIIS_I 131 203 - -
Mepo3g02725 444 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 3 432 IPR044805 -
Mepo3g02725 444 MobiDBLite consensus disorder prediction 400 444 - -
Mepo3g02725 444 Coils Coil 116 136 - -
Mepo3g02725 444 SMART TFS2_5 130 205 IPR003617 GO:0005634
Mepo3g02725 444 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 122 215 IPR035441 -
Mepo3g02725 444 MobiDBLite consensus disorder prediction 298 313 - -
Mepo3g02725 444 MobiDBLite consensus disorder prediction 314 329 - -
Mepo3g02725 444 MobiDBLite consensus disorder prediction 269 283 - -
Mepo3g02725 444 Coils Coil 384 411 - -
Mepo3g02725 444 Pfam TFIIS helical bundle-like domain 155 203 IPR017923 -
Mepo3g02725 444 ProSiteProfiles TFIIS N-terminal domain profile. 131 206 IPR017923 -
Mepo3g02725 444 MobiDBLite consensus disorder prediction 263 444 - -
Mepo3g02725 444 MobiDBLite consensus disorder prediction 213 228 - -
Mepo3g02725 444 MobiDBLite consensus disorder prediction 213 250 - -
Mepo3g02725 444 MobiDBLite consensus disorder prediction 375 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02725 Mepo-Chr3 37147450 37150731 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Mepo3g02725 Med26 4.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02725 - - gmx:100799367 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02725 3 37147450 37150731 Mepo3g02725 3 37147450 37150731 ECH