Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02717 ATGCCTTCTTCAAATTCAAAGCATAGCAGTAGCAGCAGTAAGAAGCAATCATCAAAATCCAAATCAAGGTTACAATCGTCAATTCCAGATGCCGCCACCACCATTCAATTCGACTCTCTCCTCCAACATGCTTCTCGAATCTTCCCTTCCTTCATTTCACATTCCGCTTTCGTCGCCGAAATCATCGACATTGAATCCACCGATTCTCTTTCCAGAGGAGCCGCCAAAATTTGGCTTTCTGAATCATCCATGGTTGCTTCTTCTATTGCCCCCGGTTCACTTGTCTCTGTTTCTATTCCTTCTTCAGGGATTGCGGATTCACATAATTTTCCTCTCACTTCATTGACTAATGAATGTGTCAAATGCTATGGATTGGAAACTTCTAGGACATTAGATGATGATGCTGCAGGAAATTACTTTGCTATTGCAACCGTTTTTCCTTCTAAGAAGGTATTGAAGGATGGAGTATGCCTCTCTTCGAATCTTTCCTTTGCCATGGGACGTCCTCCTTTAGGCACATGTGTGTTTGTTCACCCAGTACATAAACAATCCTTGATATATAATTGCAAAGAAATATATCTTCAGCTGGCTACTTGTAAGAGTGGAACACCATTGAAAGTTAATAATTCCCCCTCATTGGACTTGTCTAAGTCAAAATCTCGTGTCCAATCTGAGAATGATATTGTTGCATCTCCTAAAACACCTTCTTATGGATCAAGGTTTTCTAATGACAGCGTGTATTCTTCCCCTGTATATGAAGATTCAGCATCAAGTGTAACTGATAATAATGGTCAATCGGTGGCTTCATTTGATGTTAGTAAGGCATTAGGAAATGAAAGTTCCAAAAAATTACTAGAAACATGTGCAACTGGATTGTTATACTCTCGTTGTTTATTGTTGGGGAATCTTGTCACTGTACAAATGTTGTCTGATTTTTTCATTTTCCGAGTGATGGACATTAAAAAGGTGTCAACTACCATATCTGACTATTCATTGAATGGGAGCAGTAATTTAAATCTTAAGGATTCTGATATGGCTATGGTAGAGAATGTGAATCTGGCTTTCACTGTCAATTGGGAAACAAAATTATTTTTATCTTTGCCGTCTGATGTAGCATTTGAAGAGTCAATTCAAAGGGACTTATCGTGTCTGAAACTTGATAATATTTCTAAATTAGGTGGTCTATCTAAAGAAGAAATTCTTTTGAAGCGCATAATTTCTTTTTCATTGAATGATATTTTATCAAGATTTGGTCAGCAGAATACCAGAGGGGTCCTTCTTCATGGTCCACCTGGTACTGGAAAGACTTCCCTGGCTCAATTATGTGCCCATGATGCTGGGGTCAAATTTTTCTCAATAAACGGACCTGAAATTGTTACCGAGAATTATGGGGAAAGTGAGAAAGCATTGCAAGAAGTTTTTGATTCAGCCATTCAAGCTGCACCTGCCGTGATATTTATTGATAAAATAGATGCAATTGCCCCTCCAAGGAAAGATGGGGGTGAAGAGCTATCTAAAAGATTGGTTGTAACCTTATTGGGTCTGATGGACGGAATTAGAAGAAATGAAGGGTTGGTTGTGATTGCTGCTACTAATAGGCTTGACCGTATTGATCCAGCTCTCAGACGACCTGGAAGATTTGACAAGGAAGTTGAAATTGGTGTGCCATCACAAGCGCAACGGGGAGATATTTTGCACGCTATTCTCTGTGAAATAAATCACTCTCTTTCTGAGACACAAATTGAAGAGCTTGCCTCAATAACTCATGGATTTGTAGGTGCTGATTTAGTTGGCCTTCGCGATTGGGCAGCTTCTATTTGTCTACGACGTTATGCTGAACAGAAACTTAAGAAAACTTGCAATGCTAGTTCTGATGACATAACAGAGCAACCCACCCCATTGAAAAGTGCAACAAACTCGAGAGACCATTCAGGTATTATAACTTCATCTGTTTCAGAAATGTCAGTGGCCTCCAGTCTTTTATTACCTTCCTTCCCGATGGGAGAAACTTCTGAAATTATAGATGAGACGCCTGATCATGGTGAAGAAGAGCATGTTTTGAAAGTGACTTTTGAGGATTTTCAGAAGGCTAGGCCTGAAATAAGACCTAGTGCCATGAGAGAGGTGACCCTTGAGGTTCCAAAGGTTAATTGGGAAGATATCGGCGGCCAGAAGGAGGTCAAAAATCAATTGTTGGAAGCAGTAGTATGGCCCCAAAAGCACCGTGATGCATTCACCCGTATTGGGACTGATCCTCCAACAGCTGTATTGATGTTTGGGCCTCCAGGTTGTAGCAAAACCCTCATGGCACGTGCAGTTGCTTCTGAAGCAGGACTGAACTTTCTAGCAGTCAAGGGTCCTGAACTCTTCAGCAAATGGGTTGGCGAGTCTGAGAAGGCCGTCAGATCATTGTTTGATAAAGCAAGGGCCAATGCCCCAGCAATTATATTTTTCGATGAAATTGACAGTCTTGCTATAACTCGTGGGAAAGATGGTGACGGTGTTTCAGTGTCCGATAGGGTCATGGCTCAACTTCTTGTTCAATTGGATGGTGTGCTTAAAAGAGTTGATGTTGTTGTCATAGCTGCTACAAATAGGCCAGACAAGATTGACCCTGCTCTTTTAAGACAAGGACGCTTTGACCGTCTTCTATATGTGGGACCTCCAAATGAGATAGACAGAGAAGAGATATTTAGCATTCATTTGCGCAAAACTCCATATGATTCTGATGTTAGCATGAAAGAACTGGCTCAACTGACAGATGGTTATACTGGGGCTGATATAGCACATATATGTCGACAAGCAGCTCTTGCAGCATTGGAGGAAAGCTTTGATGCTTCCATTGTAACAATGAAGCACTTTAAGATGGCAATTGAACAGGTTCATCCCTCAGAATTTCAGTCCTACCAAAAGCTGTCAGCAAAATTTCAAAGGGCCGTGCTCTCTGATGCGATTTAA 2958 0.4101 MPSSNSKHSSSSSKKQSSKSKSRLQSSIPDAATTIQFDSLLQHASRIFPSFISHSAFVAEIIDIESTDSLSRGAAKIWLSESSMVASSIAPGSLVSVSIPSSGIADSHNFPLTSLTNECVKCYGLETSRTLDDDAAGNYFAIATVFPSKKVLKDGVCLSSNLSFAMGRPPLGTCVFVHPVHKQSLIYNCKEIYLQLATCKSGTPLKVNNSPSLDLSKSKSRVQSENDIVASPKTPSYGSRFSNDSVYSSPVYEDSASSVTDNNGQSVASFDVSKALGNESSKKLLETCATGLLYSRCLLLGNLVTVQMLSDFFIFRVMDIKKVSTTISDYSLNGSSNLNLKDSDMAMVENVNLAFTVNWETKLFLSLPSDVAFEESIQRDLSCLKLDNISKLGGLSKEEILLKRIISFSLNDILSRFGQQNTRGVLLHGPPGTGKTSLAQLCAHDAGVKFFSINGPEIVTENYGESEKALQEVFDSAIQAAPAVIFIDKIDAIAPPRKDGGEELSKRLVVTLLGLMDGIRRNEGLVVIAATNRLDRIDPALRRPGRFDKEVEIGVPSQAQRGDILHAILCEINHSLSETQIEELASITHGFVGADLVGLRDWAASICLRRYAEQKLKKTCNASSDDITEQPTPLKSATNSRDHSGIITSSVSEMSVASSLLLPSFPMGETSEIIDETPDHGEEEHVLKVTFEDFQKARPEIRPSAMREVTLEVPKVNWEDIGGQKEVKNQLLEAVVWPQKHRDAFTRIGTDPPTAVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFDKARANAPAIIFFDEIDSLAITRGKDGDGVSVSDRVMAQLLVQLDGVLKRVDVVVIAATNRPDKIDPALLRQGRFDRLLYVGPPNEIDREEIFSIHLRKTPYDSDVSMKELAQLTDGYTGADIAHICRQAALAALEESFDASIVTMKHFKMAIEQVHPSEFQSYQKLSAKFQRAVLSDAI 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02717 985 Gene3D - 717 965 IPR027417 -
Mepo3g02717 985 Gene3D - 384 554 IPR027417 -
Mepo3g02717 985 MobiDBLite consensus disorder prediction 210 236 - -
Mepo3g02717 985 SMART AAA_5 752 890 IPR003593 GO:0016887
Mepo3g02717 985 SMART AAA_5 421 557 IPR003593 GO:0016887
Mepo3g02717 985 FunFam calmodulin-interacting protein 111 isoform X1 713 888 - -
Mepo3g02717 985 ProSitePatterns AAA-protein family signature. 525 543 IPR003960 GO:0005524|GO:0016887
Mepo3g02717 985 Pfam AAA+ lid domain 910 955 IPR041569 -
Mepo3g02717 985 Gene3D - 555 716 - -
Mepo3g02717 985 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 714 966 IPR027417 -
Mepo3g02717 985 Gene3D - 889 959 - -
Mepo3g02717 985 PANTHER AAA-FAMILY ATPASE 72 977 - -
Mepo3g02717 985 CDD RecA-like_CDC48_r2-like 727 886 - -
Mepo3g02717 985 MobiDBLite consensus disorder prediction 623 642 - -
Mepo3g02717 985 MobiDBLite consensus disorder prediction 1 26 - -
Mepo3g02717 985 MobiDBLite consensus disorder prediction 621 642 - -
Mepo3g02717 985 Pfam ATPase family associated with various cellular activities (AAA) 756 887 IPR003959 GO:0005524|GO:0016887
Mepo3g02717 985 Pfam ATPase family associated with various cellular activities (AAA) 425 554 IPR003959 GO:0005524|GO:0016887
Mepo3g02717 985 FunFam Putative vesicular transport protein (CDC48) 377 554 - -
Mepo3g02717 985 ProSitePatterns AAA-protein family signature. 858 876 IPR003960 GO:0005524|GO:0016887
Mepo3g02717 985 FunFam spermatogenesis-associated protein 5-like protein 1 889 972 - -
Mepo3g02717 985 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 394 613 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02717 Mepo-Chr3 37077866 37088487 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02717 13 983 Calmodulin-binding Proteins AT3G56690 52.098 0.0 911