Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02716 ATGAGAGAAGATGATTCAAATTGGTTTTCAAGATGGGAAGAACAACTTCCACCACCAGAAGAACTCATGCCTCTATCACAAACCCTAATCACACCTGATCTCGCCATCGCTTTCGACATACGAAACAACCCTAATCCACCCACAATCCCACCACCACAACAACAACAACCACCACCTTCTTCTCTTCCTTCCTCCACCGATTTCGCCGATTCAACTGAACTCACCTCCGGCACCGCCGGCGAAGAACCAGCTCGCACACTCAAACGCCCTCGTCTTGTCTGGACCCCACAGCTCCACAAACGCTTCGTCGACGCCGTGGCGCATCTCGGTATCAAGAACGCTGTTCCCAAGACGATAATGCAGCTTATGAGTGTCGATGGTTTAACGAGAGAAAACGTTGCGAGTCATCTTCAGAAATATCGTCTTTATCTTAAACGCATGCAAGGGATTTCTTCTGGTGGTGGTGGTGGTTCCGGTGGTGGCTCTGCTTCTGTTAATGATGCTGCTACTGATCATTTATTTGCCAGCTCCCCTGTACCGCCGCATTTTCTTCATCCGGTTGCTCGTCCGAATTCGGATCATTTTATGCCGTTTGTTCCTGTTCCTGCTATTCATCATCAACAGCAGATGGCTGCTGCTCAGTATCATCGGCCAGTTGGGCATTTTGGGTCACCGCCGAATGGACATTTTGATAATCCTTTTTTGTCTAGACAGCAACATCATCAACAGCAAAATCAGCATCAACACCAGCACCAGCACCAGCAGCAGCTTCATAGGATTGGGGCACAGGTGCATCATAACACTTTAGGTGGTGGTGTTGGTGGTGGTTATGTGGAGGATATGGAATCAGCTAATGCAACTGGAGGGAGAAAGGTTCTGACTTTGTTTCCAACCGGAGATGATTGA 906 0.4857 MREDDSNWFSRWEEQLPPPEELMPLSQTLITPDLAIAFDIRNNPNPPTIPPPQQQQPPPSSLPSSTDFADSTELTSGTAGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISSGGGGGSGGGSASVNDAATDHLFASSPVPPHFLHPVARPNSDHFMPFVPVPAIHHQQQMAAAQYHRPVGHFGSPPNGHFDNPFLSRQQHHQQQNQHQHQHQHQQQLHRIGAQVHHNTLGGGVGGGYVEDMESANATGGRKVLTLFPTGDD 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02716 301 FunFam Two-component response regulator 85 148 - -
Mepo3g02716 301 MobiDBLite consensus disorder prediction 231 258 - -
Mepo3g02716 301 NCBIfam myb-like DNA-binding domain, SHAQKYF class 90 142 IPR006447 GO:0003677
Mepo3g02716 301 MobiDBLite consensus disorder prediction 44 59 - -
Mepo3g02716 301 Gene3D - 86 148 - -
Mepo3g02716 301 Pfam Myb-like DNA-binding domain 93 141 IPR001005 -
Mepo3g02716 301 MobiDBLite consensus disorder prediction 35 88 - -
Mepo3g02716 301 MobiDBLite consensus disorder prediction 226 258 - -
Mepo3g02716 301 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 279 IPR044841 GO:0003700|GO:0006355
Mepo3g02716 301 SUPERFAMILY Homeodomain-like 86 146 IPR009057 -
Mepo3g02716 301 MobiDBLite consensus disorder prediction 1 23 - -
Mepo3g02716 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 94 145 IPR017930 -
Mepo3g02716 301 MobiDBLite consensus disorder prediction 60 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02716 Mepo-Chr3 37065002 37067128 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02716 1 301 G2-like Transcription Factor Family AT3G10760 56.609 1.15e-92 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo3g02716 Myb_DNA-binding 2.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02716 - - ccaj:109802866 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02716 3 37065002 37067128 Mepo3g02716 3 37065002 37067128 ECH