Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02713 ATGGCTTCCTCCGCTTCTTCTTCTTCCAAAAACCAGGATTCTGAATTAATATTTAACTATGATAGGAATCCAAGCTGGATCTATGATGTGTTTTTGAGTTTCTGCGACAAAGACACTAGTGAATCTTTTCAATCAAATCTTTATACTGCTCTCACAGCGGATGGAATTGTTGTATACAAGGATGAAGACAAGCTTTTAAATCGTGATCAGATAATAACATCCTCAGTTCTGCATGCCATTGAACGTTCTAGATTGTCTATTATTGTTTTCTCAAAAATTTATGCTGATTCAACATGGTGTCTTCAAGAGTTGGAGAAAATAACGGAGTGCCGCAGAGCCACAGGATTTGCTGTGCATTCCAGGAACGAAAGTGAGGATATCAGGAAAATAGTAGACCATGTTACTAATTTACTAGACAGAACAGACTTATTCGTTGCGGACCATCCAGTGGGGGTAAATTCTCGTGTTCAAGATGTTATTCAACTATTGAACAGTCAAGAATCAAAAGACCCTTTACTGCTTGGAATATGGGGCATGGGAGGGATCGGCAAAACAACAATTGCTAAAGCTGCTTATAATAAAATTCGTCAAGATTTTGAGGCGAAGAGTTTCCTCCTAAATGTCAGGAAAGTTTGGGAACAAGATAATGGCGTAGTTTGTCTACAACAACGACTCCTTTCTGATATCTACAAAACAACAAAAATAAAGATAGATACAGTTGAATCAGGAAAAATGATATTGCAGGAAAGACTTCGTCATAAGAGGATATTTCTTGTGCTTGACGATGTGAATAAAGTGGACCAATTGAATGCTTTGTGTGGAAGTCATGAATGGTTTGGTGAAGGAAGTAGAATAATGATAACTACAAGAGATGATGATTTATTTAGTAGGCTTAAAGTTGACTATGTGTATAGAATGAAAGAAATGGATGGCAATGAATCTCTTGAGCTTTTTAGTTGGCATGCATTCAAGCAACCAATTCCGATAGAAGGTTTTGGTGACCTTTCTACTGATTTTATTAAGTACTCTGGGGGATTGCCTCTAGCTCTTCGAGTCATTGGGTCCTTTTTGTTGACCAGACGAAGAAAACAAGAGTGGGAGAGTTTATTGGAGAAATTCACAGAAAACCCTAATGATAAAAACCCTAATGGTAAAATACTGAAGGTGCTGAGAGTTAGTTTTGATGGTTTATCCGACGATATCAAAGAAACATTCTTGGATATAGCTTGTTTGAACTTAAGTGGGATGTACTTGGATGATTTAATTCAGATATTCAAAAAGGATGTGCATTTCACAGAACATGGAATGGAGGAACTCGTAACTAAAAGCCTTGTAAAGTTAGATAGTGAGAAAAGGATTGAAATGTATGATTTGTTACAACTGTTAGGAAGAGAAATTAGAAAGGAAAAATCAACGACTATGGCTGCGGGAAGGATTTACGATGTCTTCTTGAGTTTCCGAGGGGATGACACTCGTGCAAAATTCATTTCACATCTCTATACAGCTCTTGAAAATGCTGGAATTTATGTTTTTAGAGACAATGATGAGATTCAACGAGGAGATCAGATCTCAGCGTCATTGCTGCAAGCAATTGGACAGTCTAAAATTTCTATCGTTGTCTTGTCTAGAAGCTATGCTAATTCAAGATGGTGTATGCTAGAGCTGGAGAACATCATGGACATTAGCAGAGCCCAGGGTATGGAGGTTGTACCAGTGTTCTATGAAATAGATCCCTCAGAAGTACGCAATCAGACGGGAAAGTTTGGTGAAGATTTTGAATCTCTCTTATCAAGAACGTCAGTGGCTACACACAAGTTGAGTAACTGGAAAACAGCACTTGCCGAAGTTGGTGGTACAGCAGGTGTTGTCATCATAAATTCCGGGAACGAAAGTGAGGATATCAGGAAAATAGTAGACCATGTTACTAATTTACTAGACAGAACAGACTTATTCGTTGCGGACCATCCAGTGGGGGTAAATTCTCGTGTTCAAGATGTTATTCAACTATTGAACAGTCAAGAATCAAAAGACCCTTTACTGCTTGGAATATGA 2052 0.3811 MASSASSSSKNQDSELIFNYDRNPSWIYDVFLSFCDKDTSESFQSNLYTALTADGIVVYKDEDKLLNRDQIITSSVLHAIERSRLSIIVFSKIYADSTWCLQELEKITECRRATGFAVHSRNESEDIRKIVDHVTNLLDRTDLFVADHPVGVNSRVQDVIQLLNSQESKDPLLLGIWGMGGIGKTTIAKAAYNKIRQDFEAKSFLLNVRKVWEQDNGVVCLQQRLLSDIYKTTKIKIDTVESGKMILQERLRHKRIFLVLDDVNKVDQLNALCGSHEWFGEGSRIMITTRDDDLFSRLKVDYVYRMKEMDGNESLELFSWHAFKQPIPIEGFGDLSTDFIKYSGGLPLALRVIGSFLLTRRRKQEWESLLEKFTENPNDKNPNGKILKVLRVSFDGLSDDIKETFLDIACLNLSGMYLDDLIQIFKKDVHFTEHGMEELVTKSLVKLDSEKRIEMYDLLQLLGREIRKEKSTTMAAGRIYDVFLSFRGDDTRAKFISHLYTALENAGIYVFRDNDEIQRGDQISASLLQAIGQSKISIVVLSRSYANSRWCMLELENIMDISRAQGMEVVPVFYEIDPSEVRNQTGKFGEDFESLLSRTSVATHKLSNWKTALAEVGGTAGVVIINSGNESEDIRKIVDHVTNLLDRTDLFVADHPVGVNSRVQDVIQLLNSQESKDPLLLGI 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02713 683 Gene3D - 119 303 IPR027417 -
Mepo3g02713 683 ProSiteProfiles TIR domain profile. 478 645 IPR000157 GO:0007165
Mepo3g02713 683 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 467 IPR044974 GO:0006952
Mepo3g02713 683 ProSiteProfiles TIR domain profile. 26 167 IPR000157 GO:0007165
Mepo3g02713 683 Pfam TIR domain 28 113 IPR000157 GO:0007165
Mepo3g02713 683 Pfam TIR domain 480 643 IPR000157 GO:0007165
Mepo3g02713 683 Gene3D - 394 469 IPR036388 -
Mepo3g02713 683 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 135 408 IPR027417 -
Mepo3g02713 683 Gene3D - 22 118 IPR035897 -
Mepo3g02713 683 Gene3D - 475 653 IPR035897 -
Mepo3g02713 683 SUPERFAMILY "Winged helix" DNA-binding domain 385 476 IPR036390 -
Mepo3g02713 683 SUPERFAMILY Toll/Interleukin receptor TIR domain 23 112 IPR035897 -
Mepo3g02713 683 FunFam Disease resistance protein (TIR-NBS-LRR class) 477 647 - -
Mepo3g02713 683 SMART till_3 27 169 IPR000157 GO:0007165
Mepo3g02713 683 SMART till_3 479 619 IPR000157 GO:0007165
Mepo3g02713 683 Gene3D - 309 393 IPR042197 -
Mepo3g02713 683 SUPERFAMILY Toll/Interleukin receptor TIR domain 473 621 IPR035897 -
Mepo3g02713 683 PRINTS Disease resistance protein signature 343 357 - -
Mepo3g02713 683 PRINTS Disease resistance protein signature 250 264 - -
Mepo3g02713 683 PRINTS Disease resistance protein signature 173 188 - -
Mepo3g02713 683 Pfam NB-ARC domain 155 391 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02713 Mepo-Chr3 37028451 37034925 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02713 150 481 WRKY Transcription Factor Family AT5G45050 32.641 3.99e-45 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02713 - - mtr:11408937 966.837