Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02711 ATGGCTTTCTCAAGCTCTTCTTCTAGCACCGACTTATTCGTTGCCGACCATCCTGTTGGGTTAGAATCTCGTGTACAACATGTTATTCAACTGCTGAAGCTCAACACCGAGCGATCAGAAGAAACTCGAGTGATTGGGATATGTGGAATTGGAGGGATTGGCAAAACAACAATTGCCAAAGCAGCTTATAATGAAATCCATCACCATTTTGAGGCAAAGAGCTTCCTCTTAGATATCAGTGAAGTTTGGGAGCAAATTAATGGCGAAGTTTCTTTACAGCAACAACTTCTTTCTGATATCTACAAAACAACAAAAATAAAAAAGATAGATACAGTTGAATCAGGAAAAATGATATTGCAGGAAATGCTTCCGCAGAAGAGGATATTTCTTGTGTTGGACGGTGTGGATAAACAGGACCAGTTGGATACTTTGTGCGGAACTCGCAAATGGGTTGGTCAAGGAAGTATAATAATTATCACAGTACCAAATAAAAACATGCTTCTTCGTTTTGAAACTGACCATGTATATGAAATGAAACCAATGAACATATCTGAATCTCTTGAGCTTTTTAGTTGGTATGCATTCAACCAACCAAATCCTATTGAAGATTTTGCTGACATTTCTAAAGAAATTGTTACCAACTCTGATGGATCGCCACTAGTTCTTGAAGTCATTGGGTCCTTTTTGTTTACGAGGAGAAGGAAAGAAGAGTGGAAGAGTGTATTAGAGAAACTCAAACTCATTCCAAAAGACGATGAGTTAGAGAAGCTCAAAATAAGTTTTGATGGTTTAAGTGAAGATGATACGAAAAAAATATTCCTTGATATAGCTTCAAACCTATGTGGGATGGACCGGGATGATGTAATTAAGATACTAGAAGACGGTGGACATTCTGCAGAAAATGGAATAAGAGTCCTTGTACAACGAAGACTTGTAACTGTAGATAGCAAGAACAAGATTGGTATGCATTATTTAGTGCAAGGATTTGGAAGAGAAATTATAAGGCAAAGTTCAATGTCTAACGAAAAGATCTACGACGTGTTCTTGAGTTTCAGAGGGATAGATTGTCGTACAAAATTCATTTCACATCTCTATACCTCTCTTCAAAATGCTGGTATTTATGTTTTCAAAGACGACGATGAGATTCAACGAGGGGATCAAATCTCAATCTCACTTTTGAAAGCAATTGCACAATCTAGTATTTCTATCGTTGTTCTGTCTAGCAATTATGCTAATTCAAGATGGTGTATGCTAGAGTTGGAGAACATCATGGGAGTTGGCAGAAGACGAGGTCGGGTGGTTATACCAGTGTTCTACGAGGTAGATCCCTCAGAAGTACGACATCAAACCGGCATGTTTGGAGACGGTTTTGAAAAACTCATCTCAAGAATTTCAGTGGAAAAATATAGGAAGATGAATTGGAAAACAGCACTCCTTGAAGTCGGTGGTTTAGCTGGGGTTGTCGTTCTAAATTCCAGGTAG 1482 0.3833 MAFSSSSSSTDLFVADHPVGLESRVQHVIQLLKLNTERSEETRVIGICGIGGIGKTTIAKAAYNEIHHHFEAKSFLLDISEVWEQINGEVSLQQQLLSDIYKTTKIKKIDTVESGKMILQEMLPQKRIFLVLDGVDKQDQLDTLCGTRKWVGQGSIIIITVPNKNMLLRFETDHVYEMKPMNISESLELFSWYAFNQPNPIEDFADISKEIVTNSDGSPLVLEVIGSFLFTRRRKEEWKSVLEKLKLIPKDDELEKLKISFDGLSEDDTKKIFLDIASNLCGMDRDDVIKILEDGGHSAENGIRVLVQRRLVTVDSKNKIGMHYLVQGFGREIIRQSSMSNEKIYDVFLSFRGIDCRTKFISHLYTSLQNAGIYVFKDDDEIQRGDQISISLLKAIAQSSISIVVLSSNYANSRWCMLELENIMGVGRRRGRVVIPVFYEVDPSEVRHQTGMFGDGFEKLISRISVEKYRKMNWKTALLEVGGLAGVVVLNSR 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02711 493 ProSiteProfiles TIR domain profile. 343 493 IPR000157 GO:0007165
Mepo3g02711 493 SUPERFAMILY Toll/Interleukin receptor TIR domain 334 486 IPR035897 -
Mepo3g02711 493 Gene3D - 342 493 IPR035897 -
Mepo3g02711 493 Gene3D - 9 176 IPR027417 -
Mepo3g02711 493 SMART till_3 344 484 IPR000157 GO:0007165
Mepo3g02711 493 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 276 IPR027417 -
Mepo3g02711 493 SUPERFAMILY "Winged helix" DNA-binding domain 257 338 IPR036390 -
Mepo3g02711 493 PRINTS Disease resistance protein signature 215 229 - -
Mepo3g02711 493 PRINTS Disease resistance protein signature 44 59 - -
Mepo3g02711 493 PRINTS Disease resistance protein signature 122 136 - -
Mepo3g02711 493 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 340 IPR044974 GO:0006952
Mepo3g02711 493 Pfam NB-ARC domain 24 246 IPR002182 GO:0043531
Mepo3g02711 493 FunFam Disease resistance protein (TIR-NBS-LRR class) 341 493 - -
Mepo3g02711 493 Gene3D - 181 265 IPR042197 -
Mepo3g02711 493 Pfam TIR domain 345 479 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02711 Mepo-Chr3 37011813 37013615 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02711 19 343 WRKY Transcription Factor Family AT5G45050 30.368 2.02e-39 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02711 - - tpra:123891787 576.63