LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g02709	ATGTTGCTATGTTGCTGCGTAAATAGTGACAGGTTGAGGAATGAAAGTAAGGATATCATAAAAGTAGTATCCCATGTTACCAAGTTACTAGACAGAACAAACTTATTCGTTGCGGACCATCCAGTGGGGGTAGATTCTCGTGTTCAAGATGTTATTCAACTATTGAACAGTCAAGAATCAAAAGACCCTTTACTGCTTGGAATATGGGGCATGGGAGGGATTGGCAAAACAACAATTGCTAAAGCTGCTTATAATAAAATTCGTCGTGACTTTGATGCAAAGAGTTTCCTCCTAAATGTCAGGGAAAATTGGGAACAAGATAATGGTCAGGTTTCTCTACAACAACGACTCCTTTCTGATATCTACAAAACAACAAAAATAAAGATTGATACAGTTGAATCGGGAAAAATGATATTGAAGGAAAGACTTCAGAAGAAAAAGATATTTCTTGTGTTGGACGATGTGAATAAACAGGACCAATTGAATGCTTTGTGTGGAAGTCACGGATGGTTTGGTCAAGGAAGTAGAATTATCATCACAACAAGAGATGATGGTTTACTTGGTAGTCTTAAGCAGGACCATATATATAGAATGAAAAAAATGGATGCCAATGAATCTCTTGAGCTTTTTAGTTTGCATGCATTCAAGGAAACAACTCCTATGGATGGTTTTGCTGAACTTTCTAGAGATTTTGTTAAGTATTCCGGGGGATTGCCGCTAGCTCTTCAAGTCATTGGGTCCTTTTTTAAGACCAGGAGAAGAAAAATAGAGTGGGAGAGTGTATTGGAGAAACTCAAACTCATTCCTAATGAGAAAGTGTTAGAGAAGCTTAAAATAAGTTTTGATGGTTTAAGTGATGATGATATGAAAGAAATATTCCTTGATATTGCTTTTTTCTTTATTGGGATGAACCAGGAAGATGTAACTAAAATATTGGAACACTGTGGGCATTATGCAGATATTGGAATAAGTGTCCTAGTACAGCAAAGCCTTATAACTGTTGATCAAAAGAACAAAATTGGAATGCATGATTTGCTAAGAGACATGGGAAGAGAGATCGTCCGCAATAAATCAACAGAGGGAGGCAAGGAGCCTAGTAGGTTATGGCGTTATGAGGATGCTCATCATGTGTTGTCAAAAGACACGAAAACTTTAGATGTCAAGGGGCTGACTTTAAAGATGTCAAGAATGGATGCCACAACTTATCTGGAAACTAAAGATTTTGAGAAGATGAACAGGCTTAGATTACTTCAGCTTGCTGGGGTACAACTTAGCGGAGATTACAAATATCTTTCAAAAGATCTTAGATGGCTTTGTTGGCATGGCTTTCATTTAAAATATACACCAGCAGAATTTCATCAAGAACGTTTATTGAAGTTTCTTAATCTTAGTTATTCTCATAACTTGAGACAAACCCCGGACTTTTCAAACTTGCCGAATCTAGAAAAGTTAATACTCAAAGATTGTCCAAGTTTATCCTCATCGGTAAAAACTCTCATTGTGTCTGGATGTACAAAAATTGACAAGTTGGAAGAGGACATAGAACAGATGACATCTTTGACCACCCTGGTTGCGGATAATACTGCTGTAACAAGAGTGCCCTTTGCAGTAGTAAGATCAAAAAGCATTGGATTTATTTCACTCTCACAAAATTCCTTGACATCACTTTTAATTCAAATTGGAATGAACTGTCATGTCACTAATACGCTCAAAGAAAACATTTTCCAGAAAATGCCTCCCAATGGGTCTGGTTTACTCCCCGGTGACAATTATCCTGATTGGCTAGCCTTCAATGATAACAATTCTTCTGTAACTTTCGAAGTTCCACAAGTGGATGAGCGTAGCTTGAAAACGATCACGTGCATTGTCTATTCTTCTTCTCCAGATGTTATAACATCAGAAGGCCTTAAAGTTTTGTTGGTGATAAATTGTACAAAGAACACCATTCAGCTCTATAAGAGAGACGCATTATTAGCCTCCTTTGATGAAGAGGAGTGGCAGAGAGTAGTATCAAATACAGAACCAGGTGATATAGTGAAGGTTACGGTTGTTTTTGAAAACAAATTTATCGTGAAGAAGACAACAGTTTATCTAGTCTATGATGAACCAAATGATAAAAAGGCAAAGCACTGCCTTGAGTCAGATGATAAGGACATTGGATCTAGTGGTGATGGAAATATATTTGGTAGACTCTTCTTCAGACTTCCTTCACTTGTTCGAACCGTTCTGATTTCACGACCTTTCTGGATCTGTTCGGCTGTTACTATTGTTTGGCGGTCTCGCTTCCGTTCTAAGAAATGA	2301	0.3759	MLLCCCVNSDRLRNESKDIIKVVSHVTKLLDRTNLFVADHPVGVDSRVQDVIQLLNSQESKDPLLLGIWGMGGIGKTTIAKAAYNKIRRDFDAKSFLLNVRENWEQDNGQVSLQQRLLSDIYKTTKIKIDTVESGKMILKERLQKKKIFLVLDDVNKQDQLNALCGSHGWFGQGSRIIITTRDDGLLGSLKQDHIYRMKKMDANESLELFSLHAFKETTPMDGFAELSRDFVKYSGGLPLALQVIGSFFKTRRRKIEWESVLEKLKLIPNEKVLEKLKISFDGLSDDDMKEIFLDIAFFFIGMNQEDVTKILEHCGHYADIGISVLVQQSLITVDQKNKIGMHDLLRDMGREIVRNKSTEGGKEPSRLWRYEDAHHVLSKDTKTLDVKGLTLKMSRMDATTYLETKDFEKMNRLRLLQLAGVQLSGDYKYLSKDLRWLCWHGFHLKYTPAEFHQERLLKFLNLSYSHNLRQTPDFSNLPNLEKLILKDCPSLSSSVKTLIVSGCTKIDKLEEDIEQMTSLTTLVADNTAVTRVPFAVVRSKSIGFISLSQNSLTSLLIQIGMNCHVTNTLKENIFQKMPPNGSGLLPGDNYPDWLAFNDNNSSVTFEVPQVDERSLKTITCIVYSSSPDVITSEGLKVLLVINCTKNTIQLYKRDALLASFDEEEWQRVVSNTEPGDIVKVTVVFENKFIVKKTTVYLVYDEPNDKKAKHCLESDDKDIGSSGDGNIFGRLFFRLPSLVRTVLISRPFWICSAVTIVWRSRFRSKK	766

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g02709	766	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	17	589	IPR044974	GO:0006952
	Mepo3g02709	766	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	27	296	IPR027417	-
	Mepo3g02709	766	Gene3D	Ribonuclease Inhibitor	352	645	IPR032675	-
	Mepo3g02709	766	Gene3D	-	200	285	IPR042197	-
	Mepo3g02709	766	PRINTS	Disease resistance protein signature	65	80	-	-
	Mepo3g02709	766	PRINTS	Disease resistance protein signature	476	492	-	-
	Mepo3g02709	766	PRINTS	Disease resistance protein signature	142	156	-	-
	Mepo3g02709	766	PRINTS	Disease resistance protein signature	235	249	-	-
	Mepo3g02709	766	SMART	AAA_5	62	202	IPR003593	GO:0016887
	Mepo3g02709	766	Pfam	NB-ARC domain	46	266	IPR002182	GO:0043531
	Mepo3g02709	766	Gene3D	-	25	195	IPR027417	-
	Mepo3g02709	766	SUPERFAMILY	L domain-like	342	558	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g02709	Mepo-Chr3	37001651	37006537	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo3g02709	42	539	WRKY Transcription Factor Family	AT5G45050	29.496	1.14e-61	223

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g02709	-		-	mtr:11408937	860.136