Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02708 ATGGCTTCCTCCAGATCTTCTTCCAGCACAGAATTATTCGTTGCAGACCATCCGGTGGGGGTAGAATCTCGTGTACAAGATGTTATTAACCTATTGTACAGCAAACAATCAGCAGGTCCTCTACTGCTTGGGATATCCGGCGAGGGAGGGATTGGCAAAACAACCATTGCTAAAGCCACTTATAATAAACTCCGTCACTCTTTTAGCGAAGGGAGTTTTCTCCTAAATGTCGGGGAAGTTTGGGAACAAGACAATGGCCAAGTTTCTTTACAACAACAGCTTGTTTATGTTATCGGTGGCAGCAGAAGAGTAATGATAAATTCAGTTGAATTGGGAAAAAGGATGTTGCAGGGAATGCTTCCCCGGAGGAAGATGTTTCTTGTGTTGGATGATGTGAATAAACAGGAGCAATTGGACGCTTTGTGCATAAGTCGCAGATGGTTTTGTCAAGGAAGTATAATAATCATCACAACAAGAGATGTTGATTTACTTCGCAGGCTTCAGGTGGATCATGTATATACAACGAACGCGATGGATGAGAGTGAATCTCTTCAACTTTTTAGTTGGTATGCATTCAAGCAACCAATTCCTAGAGAAGGTTTTGCTCACAGTTCTAGATGTGTTGTTGAGTATTGTAGGAGAATACCATTACTTCTTGAAATCATTGGGTCCTTTTTGTCCAATCCAAGTAGAAGAGTGTGGGGTACGGTTCGACATAAACTCGTAAATTCTGAGGGAATAATGAAGATACTGAGAATAAGTGTTGATGGTTTAAGCGATGATGATGTTAGAGAAATATTCTTTGCGATAGCTATAAACTTAGTTGGCATGGACCGGGATGAAGTAATTCAGAAATTAAAAGACGGTGGACATTCAGCAGAAAATGGAATAGATGTCCTTGTACGACGAAGACTTGTAACTGTAGATAGCAAGAACAGGATTAGAATGCATGGTTTAGTACAAGATTGCGGAAGAGAAATTATAAGGGAAAATTCAACGGGTATGCCTGAGGAAAATGGAATCCATGTCCTTGTACAAGCAAGACTTGCAACTATAGATAGCAAAAGAATTGAATTGCATGGTTCACTGCAAGATCGCAGAAGAGAAATTATAAGGGAAAATTTCAGGGGTATTTCTGAGGAAAGGATCTATGATGTGTTCTTGAGTTTCAGAGGGGAAGATACTCGTGCAAGATTCATTTCACATCTCTATACCTCTCTTCAAAATGCTAGAATTAATGTTTTTAGAGACAATAATGAGATTCAGCGAGGTGATCAGATCTCGGTCTCACTGTTGCAAGCAATTGGGCAGTCTAGAATTTCTATTGTTGTTTTGTCTAGTAATTATGCTAATTCAAGATGGTGTATGCAAGAGTTGGAGCAAATCATGGAATGTGGAAGAAGCAGGGGTCTGGTGGTTATACCAGTTTTCTATGAAGTAAATCCCTCAGAAGTACGACATCAAACTGGCAAGTTCGGAGATGGTTTTGAAAATCTCATCTCAGGAATCTCAGTGGATGACGATGAGAAGATGAATTGGAAAGCAGCGCTCCTTGAAATCAGTGGCATAGCAGGGTTTGTCCTCATAAATTCCAGGGATGAAAGTGAGGATATGAAGAAAGTAGTAGACCATGTTACTAATTTTATTAGTCAGGGCAGACTTATTTGTTGTGAACCATCCAGTCGGGGTTGA 1692 0.4013 MASSRSSSSTELFVADHPVGVESRVQDVINLLYSKQSAGPLLLGISGEGGIGKTTIAKATYNKLRHSFSEGSFLLNVGEVWEQDNGQVSLQQQLVYVIGGSRRVMINSVELGKRMLQGMLPRRKMFLVLDDVNKQEQLDALCISRRWFCQGSIIIITTRDVDLLRRLQVDHVYTTNAMDESESLQLFSWYAFKQPIPREGFAHSSRCVVEYCRRIPLLLEIIGSFLSNPSRRVWGTVRHKLVNSEGIMKILRISVDGLSDDDVREIFFAIAINLVGMDRDEVIQKLKDGGHSAENGIDVLVRRRLVTVDSKNRIRMHGLVQDCGREIIRENSTGMPEENGIHVLVQARLATIDSKRIELHGSLQDRRREIIRENFRGISEERIYDVFLSFRGEDTRARFISHLYTSLQNARINVFRDNNEIQRGDQISVSLLQAIGQSRISIVVLSSNYANSRWCMQELEQIMECGRSRGLVVIPVFYEVNPSEVRHQTGKFGDGFENLISGISVDDDEKMNWKAALLEISGIAGFVLINSRDESEDMKKVVDHVTNFISQGRLICCEPSSRG 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02708 563 FunFam Disease resistance protein (TIR-NBS-LRR class) 380 551 - -
Mepo3g02708 563 SMART till_3 383 523 IPR000157 GO:0007165
Mepo3g02708 563 SUPERFAMILY Toll/Interleukin receptor TIR domain 379 525 IPR035897 -
Mepo3g02708 563 SUPERFAMILY "Winged helix" DNA-binding domain 247 334 IPR036390 -
Mepo3g02708 563 Gene3D - 177 259 IPR042197 -
Mepo3g02708 563 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 333 IPR044974 GO:0006952
Mepo3g02708 563 Gene3D - 9 172 IPR027417 -
Mepo3g02708 563 ProSiteProfiles TIR domain profile. 382 549 IPR000157 GO:0007165
Mepo3g02708 563 Gene3D - 378 554 IPR035897 -
Mepo3g02708 563 Pfam TIR domain 384 545 IPR000157 GO:0007165
Mepo3g02708 563 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 268 IPR027417 -
Mepo3g02708 563 Pfam NB-ARC domain 22 243 IPR002182 GO:0043531
Mepo3g02708 563 PRINTS Disease resistance protein signature 42 57 - -
Mepo3g02708 563 PRINTS Disease resistance protein signature 119 133 - -
Mepo3g02708 563 PRINTS Disease resistance protein signature 212 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02708 Mepo-Chr3 36995558 36999357 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02708 19 328 WRKY Transcription Factor Family AT5G45050 29.712 1.57e-32 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02708 - - mtr:11420146 742.265