Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02704 ATGAGAGAGGTGACCCTTGAGGTTCCAAAGGTTAAATGGGAAGATATTGGAGGCCAAAAGAAAGTCAAGAACCAGTTGTTGGAAGCACTAGTATGGCCTCAAAAGTACCAGGATGCTTTTGCCACTATTGGGACTGATCCTCCAACAGGTATTTTGATGTATGGGCCTCCAGGTTGTAGCAAAACCCTATTGGCTCGTGCTGTTGCTTCTGAAGCTGGACTGAACTTTCTAGCAGTCAAGGTTATATTTTTCGATGAAATTGATAGTCTTGCTGTAACTCGTGGGAAAGATGGTGATGGTGTTTCAGTGTCCGATAGGGTCACGAATCAACTTCTTATTCAATTGGATGGTGTGCGTAAAAGAGTTGATGTTGCTGTCATAGCTGCTACAAATAGGATAGAAAATATTGATCCTGCCCTTTTAAGACCAGGACGCTTTGACCGGTTGCTATATGTCGGACCTCCAAATGAGATGGACAGAGAAGAGATTTTTAGAATTCATTTGTGCAAAATTCCATGTGATTCTGATGTTAGCGTGAAAGAATTGGCTCAACTGACAAATGGTTATACTGGGGCTGATATATCACATATATGTCAACAAGCAGCTTTTACAGCATTGGAGGAAAGCTTTGATGCTTCCGTTGTAACAATGAAGCACTTTAAGACGGCAATTGAACATGTCCAGCCCACAGAAACTCAGTCCTATCAAAAGAGCAGCAGTTATCAGAAAGAGGATGAAGTGATTGTTGGCAATGGCAACGCCAAAGCTATTCAAATCCTTAGAAATCTCATCATAAAGCCTCGTCTCTTCCCTAGTCGGGCAAATAGGACCAGTTTGGTACGAGCAATTGTTAAGGAGTGTGGAGCAAATTTGATAATTATCAGCCCGAACACTGTTCATACCGCACATGCTGGTGATTGTGAGAGAACCCTCTGTGAGGCTTTATCTCATGTAGCCTCGGCCAAGTCGTCGTTGATGACATGGATGGTGGCTGCAATTGACCCTTCCCTAAGAAGGTATGGACATTTCGATATTGAAACTGAGGTTACAGTCCCAGATAAAAAGGAGCGCCTTGAAATTCTAGAGCTGTATACAAGGGAGATCCCTCAGAATTCATGCGACTTAGAATCTATTGCTTCATCATGCAATGGATATGTCGGATCTGATTTACGGGCTTTGTGTAATGAAGCTGTCAATTCTGCAGTTAGAAGGTCTTCAAATGCAAAGAAAGATGTTAATGACTTCAGTTTAATGATGGAAGATTGGAAGAATGCAAGGTCTCTTGTTGAACCAAGTATAACAAAAGGCATTACTCTGGAAATTCCCAAAGTGACTTGGAAAGATATTGGGGGATTGAAAGACGTGAAGGTTGTACTTTCATATCCTGCTTCGTTTTCAAGATTGGGAATAAACCCTATTCGTGGAATTCTTCTCTACGGGCCTCCAGGATGTTCCAAAACTACTCTTGCTAAAGCTGTTGCAAATGCTGCTAATGTTCCTTTCATTTCCTTGAGTTGTACAGAAATGATTTCAAAGTTTGTCGGACAAGGAGAAGGTTATCTTAGTGAAATCTTTGGCAAAGCACGGCTTGCCGGAAAAAGTATAATATTTTTTGATGAAGTTGATGCAGTAGCTGGGAAACGGGGTCATAGTTCGAGCGGTAATTCCGTATCTGAAGAGAGAGTTTTATCCACTCTGCTAACTGAAATGGATGGTTTAGAAGAAGCCAAAGGAGTCCTTGTTTTGGCAGCTACAAATTGCATTGAAGCTATTGATGATGCACTTTTGCGTCCTGGACGACTTGATCTGAAATTGTATGTGCCACCACCTGATTTGGAGGGTCGATTTGAGATACTTAAAGTATACACACGTAAGATGAAATTAGGGAGTGATGCTGAACTAGAGGGATTATGTAAGGAAGTTGGAGTAGAAGCTATAAGAGAAGCTATAACAGAAAACAAGAAAGCTAGTGTTGTTTATGGCCGCCATTTTCAGATTGTGAAGATTGCTTTAAAACCAGCATTGGCAGCAGAAATAAAGAGCTGGGTGTTTCCTTTGTCTTTGGTTGAAGACAATGTAGTCAGTTATATTTTACTTGCCACTGCAGTAATGTTTTTTATTTATTTATTCATTTATTGA 2139 0.4086 MREVTLEVPKVKWEDIGGQKKVKNQLLEALVWPQKYQDAFATIGTDPPTGILMYGPPGCSKTLLARAVASEAGLNFLAVKVIFFDEIDSLAVTRGKDGDGVSVSDRVTNQLLIQLDGVRKRVDVAVIAATNRIENIDPALLRPGRFDRLLYVGPPNEMDREEIFRIHLCKIPCDSDVSVKELAQLTNGYTGADISHICQQAAFTALEESFDASVVTMKHFKTAIEHVQPTETQSYQKSSSYQKEDEVIVGNGNAKAIQILRNLIIKPRLFPSRANRTSLVRAIVKECGANLIIISPNTVHTAHAGDCERTLCEALSHVASAKSSLMTWMVAAIDPSLRRYGHFDIETEVTVPDKKERLEILELYTREIPQNSCDLESIASSCNGYVGSDLRALCNEAVNSAVRRSSNAKKDVNDFSLMMEDWKNARSLVEPSITKGITLEIPKVTWKDIGGLKDVKVVLSYPASFSRLGINPIRGILLYGPPGCSKTTLAKAVANAANVPFISLSCTEMISKFVGQGEGYLSEIFGKARLAGKSIIFFDEVDAVAGKRGHSSSGNSVSEERVLSTLLTEMDGLEEAKGVLVLAATNCIEAIDDALLRPGRLDLKLYVPPPDLEGRFEILKVYTRKMKLGSDAELEGLCKEVGVEAIREAITENKKASVVYGRHFQIVKIALKPALAAEIKSWVFPLSLVEDNVVSYILLATAVMFFIYLFIY 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02704 712 Gene3D - 445 609 IPR027417 -
Mepo3g02704 712 Gene3D - 1 79 IPR027417 -
Mepo3g02704 712 Pfam AAA+ lid domain 374 415 IPR041569 -
Mepo3g02704 712 Pfam AAA+ lid domain 176 221 IPR041569 -
Mepo3g02704 712 Gene3D - 610 639 - -
Mepo3g02704 712 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 233 IPR027417 -
Mepo3g02704 712 FunFam spermatogenesis-associated protein 5-like protein 1 155 243 - -
Mepo3g02704 712 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 276 407 IPR027417 -
Mepo3g02704 712 PANTHER AAA-FAMILY ATPASE 273 674 - -
Mepo3g02704 712 FunFam ATPase family, AAA domain-containing 2B 442 609 - -
Mepo3g02704 712 ProSitePatterns AAA-protein family signature. 124 142 IPR003960 GO:0005524|GO:0016887
Mepo3g02704 712 Gene3D - 352 444 - -
Mepo3g02704 712 Gene3D - 156 241 - -
Mepo3g02704 712 Gene3D - 80 155 IPR027417 -
Mepo3g02704 712 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 442 651 IPR027417 -
Mepo3g02704 712 SMART AAA_5 47 156 IPR003593 GO:0016887
Mepo3g02704 712 SMART AAA_5 472 611 IPR003593 GO:0016887
Mepo3g02704 712 Pfam ATPase family associated with various cellular activities (AAA) 476 608 IPR003959 GO:0005524|GO:0016887
Mepo3g02704 712 Pfam ATPase family associated with various cellular activities (AAA) 80 153 IPR003959 GO:0005524|GO:0016887
Mepo3g02704 712 ProSitePatterns AAA-protein family signature. 579 597 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02704 Mepo-Chr3 36961053 36969889 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02704 447 657 Calmodulin-binding Proteins AT3G56690 33.480 6.27e-30 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02704 - - gmx:100814288 467.233