Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02697 ATGACACTCTCTCTACAAAATGAAGACTCAGAATTTGCACTCAAGCAAATTGGAAATGAAGGTCTCACTAAACAGATTCTTAGAAAAGGTGTCACTTGGCAAACTCCATTTTCTGGTGACCAACTTGAAGTTCATTTCAGAGGACAAGTTGAAAATGGACCACCTCTAGAATCCAGTTATGATAAAGGGTCTTCCTTTCATTTCAAGTTAGGCCAAGGTGAAGTAATCAAAGGTTGGGATGAAGGGGTTGCTACTATGAAGAAAGGGGAGAGAGCAATCTTCAAGATACCACCTTCCTTAGCATATGGGGAAGTAGGTTCTCCGCCGTTAATTCCTCCGAATGCAACTCTCATTTTTGAGATTGAAATGTTGTGTTGGAGTAGCATCAGAGACTTGACTGGTGATGGAGGAATCATGAAAAAGACAATAAGAGAAGGAGAAGGATGGGCTACTCCAAAAGAGCTTGATGAAGTGCTAGTGAAATATGAAGCAAGGCTTGAGAATGGGATGCTTATCAAATCTGATAAAGGTGTGGAGTTTAATGTAAGTGATGGCTATCTTTGTCCAGCCATGAGCATTGCAATAAAGACAATGAGAAAAGGCGAGGTGGCAGAGCTTAGTATGAAATTCTTTTATGGCCATAGTCAAAACTCAAATAGAACCATAGAGCTTCATGGTTTACTGGATTCTAATTTAATTAGCATCAAACTTGAGTTGGTATCATGGAAAATTGTTACTGATGTCACAGGAGATAAGAAAATACTGAAAAAGATTAATAAGGCCGGCGAGGGGTTTGATCGTCCTAATGAAGGATCGCATGTGAAAGTGGTATATTTCTGTAAAGGAAAAGATGGTACAATTATTGAGAGGAAAGGGTCAAAGGAAGAACCTTTTGAGTTCACAACTCAAGAAGAACAAGTGCATGAGGGTCTAGAAAGAGCAATAATGACAATGAAGAAAGCAGAACAAGCTTTAGTGACTATCAATACTAAATATTTATGTGACCAAAATAATTTGCAAGGAAACAAGGCTAATAATAAAATCCTTTACTATGAAGTTGAATTAGTTGATTTCACCAAGGAGAAGCCATTTTGGAAAATGGAAACTCAAGAGAAACTAGAAGCTTGTGAGCAGAAGAAGCATGATGGAAATCTTCTGTTCAAGGCTCAAAATTTCAGGCGCGCATCCAAGAAATATGAAAAGGCTGTAAAATACATTGAATTTGATCACACATTCAGTGACGACGAAAAGCGTCATGCTAATACCTTGAGATTATCCTGTAATTTGAACAATGCTGCTTGTAAACTTAAATATGAAGAGTACACTGAAGCTGCTAGGCTATGCACAAAGGTCCTAGAACAAGATCCCTTAAATGTGAAGGCTCTTTACAGAAGATGCCAAGCATACCTTAAAACATCAGATTTGGAGAAAGCTGAAGCTGACATTAAAAGAGCTTTGATTATTGATCCAAATAACAGAGAAATCAAACTTGAGTACAAAGAGCTCAAAATGAAGCAAAAGGAATACAATAAATATGAAGCTGACATCTTTAGCACAATGGTTTCAAGGATGAATTAG 1578 0.3758 MTLSLQNEDSEFALKQIGNEGLTKQILRKGVTWQTPFSGDQLEVHFRGQVENGPPLESSYDKGSSFHFKLGQGEVIKGWDEGVATMKKGERAIFKIPPSLAYGEVGSPPLIPPNATLIFEIEMLCWSSIRDLTGDGGIMKKTIREGEGWATPKELDEVLVKYEARLENGMLIKSDKGVEFNVSDGYLCPAMSIAIKTMRKGEVAELSMKFFYGHSQNSNRTIELHGLLDSNLISIKLELVSWKIVTDVTGDKKILKKINKAGEGFDRPNEGSHVKVVYFCKGKDGTIIERKGSKEEPFEFTTQEEQVHEGLERAIMTMKKAEQALVTINTKYLCDQNNLQGNKANNKILYYEVELVDFTKEKPFWKMETQEKLEACEQKKHDGNLLFKAQNFRRASKKYEKAVKYIEFDHTFSDDEKRHANTLRLSCNLNNAACKLKYEEYTEAARLCTKVLEQDPLNVKALYRRCQAYLKTSDLEKAEADIKRALIIDPNNREIKLEYKELKMKQKEYNKYEADIFSTMVSRMN 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02697 525 Coils Coil 495 515 - -
Mepo3g02697 525 Pfam Tetratricopeptide repeat 436 491 - -
Mepo3g02697 525 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 151 219 IPR001179 GO:0003755
Mepo3g02697 525 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 267 356 IPR001179 GO:0003755
Mepo3g02697 525 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 36 124 IPR001179 GO:0003755
Mepo3g02697 525 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 39 127 IPR001179 GO:0003755
Mepo3g02697 525 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 271 359 IPR001179 GO:0003755
Mepo3g02697 525 SUPERFAMILY TPR-like 367 520 IPR011990 GO:0005515
Mepo3g02697 525 FunFam Peptidylprolyl isomerase 364 519 - -
Mepo3g02697 525 FunFam Peptidyl-prolyl cis-trans isomerase 14 127 - -
Mepo3g02697 525 SMART tpr_5 376 409 IPR019734 GO:0005515
Mepo3g02697 525 SMART tpr_5 459 492 IPR019734 GO:0005515
Mepo3g02697 525 SMART tpr_5 425 458 IPR019734 GO:0005515
Mepo3g02697 525 SUPERFAMILY FKBP-like 242 379 - -
Mepo3g02697 525 Gene3D - 244 361 IPR046357 GO:0003755
Mepo3g02697 525 Gene3D - 10 129 IPR046357 GO:0003755
Mepo3g02697 525 ProSiteProfiles TPR repeat profile. 459 492 IPR019734 GO:0005515
Mepo3g02697 525 PANTHER PEPTIDYLPROLYL ISOMERASE 16 129 - -
Mepo3g02697 525 Gene3D - 130 243 IPR046357 GO:0003755
Mepo3g02697 525 Gene3D Tetratricopeptide repeat domain 362 519 IPR011990 GO:0005515
Mepo3g02697 525 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 155 243 IPR001179 GO:0003755
Mepo3g02697 525 SUPERFAMILY FKBP-like 18 126 - -
Mepo3g02697 525 SUPERFAMILY FKBP-like 132 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02697 Mepo-Chr3 36839558 36843436 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02697 16 524 Calmodulin-binding Proteins AT5G48570 53.965 0.0 558