Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02694 ATGTGCAACAAGGAGAAGGAGAAGGTGAATGAAGAATCAGTAGCCAATTTGAAGATGATGGAAAATCAAAACAATGAGAACAAGAGAAAGGCAATCGTGCTGGAAGAATCCCATGTTGAAACTCAAAATTCTAGGACTCCCCAAAAAGATGTTGTTGAAGAAGAATCAACCGATTCTTCCAAAGAAATTTCTCCATTTCTTCTTTTTGGATTCATTGTTGATCAGAGGAAAGGAATTCAAAAGGCTTACTCGTGCAAATTTTGTAGCAGAAAGTTCACTAGTCCACAGGCATTAGGTGGTCATCAAAATTCTCACAAATTTGAGAGAAGTCTCAAAAAAAGGATCCAACCTTTTAATGATGCTTGGACAAATTACTCAAATGGTGATCAAGGGATAAGTTTAAACACCATCTCTCCATTCTATATGGGGTGTGGATATCAATATTATGGATTTAACAATATGATTCAGAATGCAGGGTCATCAAACTTTTATGCAGGGAATTTTTATGGTGCATTGCAGCATATTCCAGAGATAGATGAAGCAAATGAAGCTAATCAAAGCATAATGAGTCAAAAAGTTAATATGTCTGAGATTGAAGTTGGTTCAGTTTCAGAGGGAGGGGCTGTTAGTGATGAAGTTGATCATGAAGACAAAGAGACTCAAGAGGAGGAAGCATCCAAGATTGATTTGACCCTTAAGCTTTGA 705 0.3688 MCNKEKEKVNEESVANLKMMENQNNENKRKAIVLEESHVETQNSRTPQKDVVEEESTDSSKEISPFLLFGFIVDQRKGIQKAYSCKFCSRKFTSPQALGGHQNSHKFERSLKKRIQPFNDAWTNYSNGDQGISLNTISPFYMGCGYQYYGFNNMIQNAGSSNFYAGNFYGALQHIPEIDEANEANQSIMSQKVNMSEIEVGSVSEGGAVSDEVDHEDKETQEEEASKIDLTLKL 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02694 234 MobiDBLite consensus disorder prediction 201 234 - -
Mepo3g02694 234 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 4 234 IPR044246 GO:0009788
Mepo3g02694 234 SUPERFAMILY beta-beta-alpha zinc fingers 80 111 IPR036236 -
Mepo3g02694 234 ProSiteProfiles Zinc finger C2H2 type domain profile. 83 110 IPR013087 -
Mepo3g02694 234 Gene3D Classic Zinc Finger 54 128 - -
Mepo3g02694 234 MobiDBLite consensus disorder prediction 20 57 - -
Mepo3g02694 234 MobiDBLite consensus disorder prediction 209 234 - -
Mepo3g02694 234 Coils Coil 3 37 - -
Mepo3g02694 234 ProSitePatterns Zinc finger C2H2 type domain signature. 85 105 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02694 Mepo-Chr3 36814008 36814719 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02694 81 234 C2H2 Transcription Factor Family AT1G24625 29.944 3.98e-12 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo3g02694 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02694 - - mtr:120577076 422.935