Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02693 ATGGCTGAGGAAAAAAACCTCAAGCGCAAAATGATGGAGGATTCAGAGCAAGAGTCGAAATCGGAGAAGGAGCCAGAGACAACACCACCAACCTCTGGATCGGATGGTGGCGATTTCTTGACCTTGAGGCTTGGTGGTGGCACAAAGCCCGCTTCCAACCCCTTGGAGAATGGTGAGCATTCAGGTTCATCTCAAAATGCTAATGTTGAACCTCCACCTGCGCCGGAAGTGAAGGAATTCTCTTGTACTTACTGTGACAAGAAATTCCCCACTTCTCAAGCGCTTGGAGGACACCAAAACGCTCATAAGCGTGAGCGTGTCTACAAAAAAATGGAAGAACAAAGGAGAGAGGATGTGATCGATTCAGCCCTAAGGTATCGATCTAATATCCTTCCATACCCTTATCAATTTTCAAGCTCTCCACACTACCAAGGGTATTCATACTTCCGTGGTGCTAACCTATCCAACTCAATTGGTGCCCATGTGAACAATACCTTGCCTTCTTGGCTTGGTGGTTCATCTTCTGGTGGCTATGGAGGGATGTATATGCCAAATACACCTCCTGCATCACGATTTGTGATGCCATTGTCAAACTCATCCCTTCCAACATCACAATTTGGGATGAATAATTTATGGGGTGGAGGTCAAAATGCTGCATTACCAACTCCACAAAGATCAAACACTGTGGGTTTGGCACTTTTAGCTCAAGCTAATCAAACCCCTCCAATTTCTGAGGCATCTTCTGATGCTGTAGAAAGAAATTTCATTGATCAAATTCCTTCTCATGATCCTATTGAAGATGAAGATGACAGAAATGAGGCAAATCCCAATGAGGAGGAACTGAACTTGGAACTCACCCTTTAA 864 0.4468 MAEEKNLKRKMMEDSEQESKSEKEPETTPPTSGSDGGDFLTLRLGGGTKPASNPLENGEHSGSSQNANVEPPPAPEVKEFSCTYCDKKFPTSQALGGHQNAHKRERVYKKMEEQRREDVIDSALRYRSNILPYPYQFSSSPHYQGYSYFRGANLSNSIGAHVNNTLPSWLGGSSSGGYGGMYMPNTPPASRFVMPLSNSSLPTSQFGMNNLWGGGQNAALPTPQRSNTVGLALLAQANQTPPISEASSDAVERNFIDQIPSHDPIEDEDDRNEANPNEEELNLELTL 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02693 287 MobiDBLite consensus disorder prediction 240 287 - -
Mepo3g02693 287 Gene3D Classic Zinc Finger 64 129 - -
Mepo3g02693 287 ProSitePatterns Zinc finger C2H2 type domain signature. 82 102 IPR013087 -
Mepo3g02693 287 ProSiteProfiles Zinc finger C2H2 type domain profile. 80 107 IPR013087 -
Mepo3g02693 287 MobiDBLite consensus disorder prediction 1 75 - -
Mepo3g02693 287 Pfam C2H2-type zinc finger 80 104 - -
Mepo3g02693 287 SUPERFAMILY beta-beta-alpha zinc fingers 78 109 IPR036236 -
Mepo3g02693 287 MobiDBLite consensus disorder prediction 54 70 - -
Mepo3g02693 287 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 49 205 IPR044246 GO:0009788
Mepo3g02693 287 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02693 Mepo-Chr3 36803197 36804060 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02693 70 182 C2H2 Transcription Factor Family AT5G25160 39.474 2.25e-12 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo3g02693 zf-C2H2_6 1.8e-06 CL0361