Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02666 ATGGATCATAATTTGGGTCAAGAATCTGTTCCTGCTGATAAGTCCAGGGTTTTAAATGTTAAGCCATTGAGGACTCTTGTTCCGGTTTTCCCGTCGCCGTCTAACCCTTCATCGTCTTCAAATCCGCAAGGTGGTGCTCCTTTTGTCGCTGTTTCTCCTGCTGGTCCTTTCCCTGCTGGTGTTGCACCCTTTTACCCCTTCTTTGTGTCACCGGAGTCTCAGAGGCTTTCTGAACAACATGCACCGAACCCAACTCCTCAACGTGCCACACCAATATCTGCTGCAGTTCCAATTAACTCATTCAAGACTCCAACTGCGGCGACAAATGGAGATGTTGGCTCATCACGGAGGAAAAGCCGGGGTCGTCGTGGACAGCTTGCCGAGGAAGAAGGCTACGATAATACTGAGGTAATTGATGTAGACGCTGAAACTGAGGGTGGGAGTTCAAAGCGCAAGAAGAGGGCAAAGGGACGACGGGCTAGTGCCGCTGCTACCGATGGGAGTGGTGTGGCTGCCGTTGATGTTGATTTAGATGCGGTGGCTCATGATATTCTCCAATCAATTAACCCCATGGTTTTTGATGTAATAAATCATCCTGATGGTAGCAGGGACTCGGTGATATATACACTTATGATATATGAAGTGCTCCGGAGAAAGCTTGGGCAAATTGAAGAATCAACAAAGGACCTTCATACTGGAGCAAAGCGACCTGATTTGAAGGCAGGCAATGTTATGATGACTAAAGGGGTTAGGAGTAACAGCAAGAAAAGGATTGGAATCGTGCCTGGTGTTGAAATTGGAGATATTTTCTTTTTCCGATTTGAGATGTGCTTAGTGGGATTACATTCACCTTCTATGGCTGGAATTGATTACCTGACTTCCAAAGCAAGTCAAGAGGAAGAGCCATTAGCTGTTAGTATTGTCTCATCTGGAGGATATGAAGATGATACAGGTGATGGGGATGTGTTGATATATAGTGGCCAAGGTGGAGTTAACCGTGAAAAGGGAGCAAGTGATCAAAAGCTTGAAAGGGGTAATCTTGCTTTGGAAAAGAGTATGCATAGAGGTAACGATGTGAGAGTCATTAGGGGTTTGAAGGATGTAATGCATCCATCTGGGAAGGTATATGTCTATGACGGAATTTACAAGATTCAAGATTCATGGGTGGAGAAAGCAAAATCTGGATTCAATGTATTTAAGTATAAATTAGCGAGGGTGCGTGGGCAGCCTGAAGCATATACAATATGGAAATCCATTCAACAATGGACCGATAAGGCGGCTCCAAGAACAGGGGTTATATTGCCCGATCTTACTTCTGGGGCTGAAAAAGTCCCTGTTTGTCTTGTTAACGATGTTGATAACGAGAAGGGCCCTGCATATTTCACTTACATCCCCACTCTCAAGAATTTGAGGGGAGTTGCTCCTGTGGAATCTTCATTTGGTTGTTCTTGTATTGGTGGGTGTCAACCTGGCAATCGTAACTGTCCTTGCATTCAAAAGAATGGAGGTTATCTTCCGTATACTGCAGCTGGGTTAGTTGCAGACCTAAAATCCGTGATACATGAGTGTGGTCCTTCTTGTCAGTGCCCTCCTACTTGCCGAAATCGGATTTCCCAAGCTGGCCTAAAATTTCGTTTGGAGGTGTTTAGAACTAGTAACAAAGGTTGGGGCCTAAGATCGTGGGATGCTATTCGTGCTGGTACTTTTATATGTGAGTATGCAGGGGAAGTCATAGATAATGCTAGAGCCGAGATGCTTGGTGCTGAAAATGAAGACGAATACATTTTTGATTCTACTCGCATCTATCAGCAGCTGGAAGTTTTTCCTGCTAACATTGAAGCTCCAAAGATCCCATCTCCGCTTTATATCACAGCAAAGAATGAAGGGAATGTTGCTCGGTTTATGAATCATAGCTGCTCTCCAAATGTCTTGTGGCGTCCGATTGTACGTGAAAATAAGAATGAACCGGATCTCCACATTGCTTTCTTTGCAATTAGACACATCCCTCCTATGATGGAGCTAACTTACGATTATGGGATAAATCTTCCTCTCAAAGCAGGTCAAAGGAAAAAGAATTGCTTATGCGGATCTGTGAAATGCAGAGGTTACTTTTGTTAA 2118 0.4429 MDHNLGQESVPADKSRVLNVKPLRTLVPVFPSPSNPSSSSNPQGGAPFVAVSPAGPFPAGVAPFYPFFVSPESQRLSEQHAPNPTPQRATPISAAVPINSFKTPTAATNGDVGSSRRKSRGRRGQLAEEEGYDNTEVIDVDAETEGGSSKRKKRAKGRRASAAATDGSGVAAVDVDLDAVAHDILQSINPMVFDVINHPDGSRDSVIYTLMIYEVLRRKLGQIEESTKDLHTGAKRPDLKAGNVMMTKGVRSNSKKRIGIVPGVEIGDIFFFRFEMCLVGLHSPSMAGIDYLTSKASQEEEPLAVSIVSSGGYEDDTGDGDVLIYSGQGGVNREKGASDQKLERGNLALEKSMHRGNDVRVIRGLKDVMHPSGKVYVYDGIYKIQDSWVEKAKSGFNVFKYKLARVRGQPEAYTIWKSIQQWTDKAAPRTGVILPDLTSGAEKVPVCLVNDVDNEKGPAYFTYIPTLKNLRGVAPVESSFGCSCIGGCQPGNRNCPCIQKNGGYLPYTAAGLVADLKSVIHECGPSCQCPPTCRNRISQAGLKFRLEVFRTSNKGWGLRSWDAIRAGTFICEYAGEVIDNARAEMLGAENEDEYIFDSTRIYQQLEVFPANIEAPKIPSPLYITAKNEGNVARFMNHSCSPNVLWRPIVRENKNEPDLHIAFFAIRHIPPMMELTYDYGINLPLKAGQRKKNCLCGSVKCRGYFC 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02666 705 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 118 697 - -
Mepo3g02666 705 MobiDBLite consensus disorder prediction 96 166 - -
Mepo3g02666 705 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 242 424 - -
Mepo3g02666 705 MobiDBLite consensus disorder prediction 115 130 - -
Mepo3g02666 705 Pfam SET domain 555 679 IPR001214 GO:0005515
Mepo3g02666 705 SUPERFAMILY PUA domain-like 241 423 IPR015947 -
Mepo3g02666 705 Gene3D - 241 425 IPR036987 -
Mepo3g02666 705 ProSiteProfiles YDG domain profile. 259 405 IPR003105 -
Mepo3g02666 705 ProSiteProfiles SET domain profile. 544 679 IPR001214 GO:0005515
Mepo3g02666 705 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 18 704 IPR025794 GO:0016571
Mepo3g02666 705 Pfam Pre-SET motif 438 536 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo3g02666 705 MobiDBLite consensus disorder prediction 96 114 - -
Mepo3g02666 705 ProSiteProfiles Post-SET domain profile. 689 705 IPR003616 -
Mepo3g02666 705 MobiDBLite consensus disorder prediction 30 46 - -
Mepo3g02666 705 SMART preset_2 434 528 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo3g02666 705 SMART set_7 544 685 IPR001214 GO:0005515
Mepo3g02666 705 MobiDBLite consensus disorder prediction 26 49 - -
Mepo3g02666 705 SMART G9a_1 254 409 IPR003105 -
Mepo3g02666 705 ProSiteProfiles Pre-SET domain profile. 480 541 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo3g02666 705 Pfam SAD/SRA domain 258 409 IPR003105 -
Mepo3g02666 705 Gene3D SET domain 426 704 IPR046341 -
Mepo3g02666 705 SUPERFAMILY SET domain 420 685 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02666 Mepo-Chr3 36542642 36546962 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02666 13 704 Su(var)3-9 homologs AT1G73100 47.051 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mepo3g02666 SAD_SRA 2.9e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02666 K24405 - gmx:100805932 1055.43