LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g02654	ATGGCTTCAGAGAAAGAAGCTGTTCTTGCAACTACTCTCTCTGCCTCCGAATCTGATCCTCCCACCATGTTTGACAGGAGTATTATCAAAAAGGAAAATCCTTCTACTGTGTTTTATGAGGATGATGAGGTCCTTGCCTTTAGGGATATAGCTCCTGAAGCTCCTCCCCATATTGTAATAATTCCGAAATCTAGAGATGGGTTGACTGGTCTATCTAAGGCTCAAGCCCCACAATTTTCGAGCCCAGTCGGGTTGAATAATATTACACTCGGTGAAGAACAACAATCAACTCAAAAAAGAAAAAGAACAAGGTTCACCCCCGGAGAAGATAAAGTTCTCATCCAAACATGGCTCATTGTTCCCAAGAATGCAGCTGCGGAGGCTAATCAAAGAGTAGATTCCTTTTGGCTAAGAATTAAAAATAATTACAATGAGCATCGCGGCCATTTCAAACCGAGGGGAGTGTCACAAATAAAATCGCGATGGCATAAGTTGAATAGCATAGTTCATAAATTTGTAGGATGCTACAAAGTAGCCTATGAGAAAAGGAAAAGTGGTAGCTCTGAGTCTGACATCATGGGAGATGCATATACACTTTATTATCAAGATGAAGGTGAACAGTTCAAGTTAGAGTATGCATGGCGATTGTTGAAAGATGAACCGAAATGGTCAAATACATCATTTGAAGGAGGTAGTAAGAGAACCAAGGTTTCTGCTTCAGGAGCATACTCGACCACTTCTAATCTGGACATGCCATCAAGTTGTGAATACAACGCTGCATCACCTACTGTGGTTTGTCTAACGGGGACAGAAGTAGAGGAAAGAAAGGGAAAATCAAAATCGGAAGAAACATCTTCAGTGGTTTGTCTTTGTCAAACAGGGACAGAAGTAGAGAAAGGAAAGGAAAAATCAAAATCGGAGGAAACATCTTCTGCTAATGTTGAGCTAATTGAAGTGAAAGAGATTCCAAAGACAAAAGTTCTCGTCATGGCAGAAATGGCACGTGTCCAAGATGAACAAAATAAGTTGAAGGAGAAAGAGTTGAATCTGAAGGAGAGAGAGTTTGAGTTGGAGTTCCTCTTTAAGGATATATCCGGGATGACAGCCAGACAACAACGAGATCATGAGATGTTGTGTAATGTGATTAGAGAAAAATATGGCATTATGTAA	1170	0.4043	MASEKEAVLATTLSASESDPPTMFDRSIIKKENPSTVFYEDDEVLAFRDIAPEAPPHIVIIPKSRDGLTGLSKAQAPQFSSPVGLNNITLGEEQQSTQKRKRTRFTPGEDKVLIQTWLIVPKNAAAEANQRVDSFWLRIKNNYNEHRGHFKPRGVSQIKSRWHKLNSIVHKFVGCYKVAYEKRKSGSSESDIMGDAYTLYYQDEGEQFKLEYAWRLLKDEPKWSNTSFEGGSKRTKVSASGAYSTTSNLDMPSSCEYNAASPTVVCLTGTEVEERKGKSKSEETSSVVCLCQTGTEVEKGKEKSKSEETSSANVELIEVKEIPKTKVLVMAEMARVQDEQNKLKEKELNLKEREFELEFLFKDISGMTARQQRDHEMLCNVIREKYGIM	389

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g02654	389	PANTHER	-	86	384	-	-
	Mepo3g02654	389	MobiDBLite	consensus disorder prediction	1	26	-	-
	Mepo3g02654	389	SUPERFAMILY	HIT-like	27	64	IPR036265	-
	Mepo3g02654	389	PRINTS	Histidine triad family signature	24	40	IPR001310	-
	Mepo3g02654	389	PRINTS	Histidine triad family signature	45	63	IPR001310	-
	Mepo3g02654	389	Coils	Coil	329	356	-	-
	Mepo3g02654	389	Gene3D	-	1	149	IPR036265	-
	Mepo3g02654	389	Pfam	No apical meristem-associated C-terminal domain	207	372	IPR029466	-
	Mepo3g02654	389	Pfam	HIT domain	30	75	IPR011146	GO:0003824

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g02654	Mepo-Chr3	36447462	36452083	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo3g02654	78	321	Glutathione S-transferase Gene Family	AT5G41240	31.227	1.33e-27	112

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g02654	-		-	tpra:123893220	602.823