Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02653 ATGGTGAGAAAGAGAAAACTCGTTAAAGCTTCTCAACAAGAAGAACCACCGCTCAAACAGCATCAACCGGAGCCTAAACCGGAACCGGTACCCGAACCCGAACCTGAACCATACATCCCGGGCGAAGAATACGAAGAGGTTGAAGAAGAAGTTGAATACGAAGAAGTTGAAGAGGAAGTAGAGGAGGAGGAGGAAGAGGAGGAAGAAGAGGAAGAAGAAGAACAACAACAAATTCAAGTAGAAGAAGACGATGAACCGATCCAGAAGCTTCTAGAACCTTTCACGAAAGAACAGATCTCGAGTCTTCTTTGCGAAGCGGCTTCGAAGCATCGTGATGTTGCGGATCGGATTCGGAAGATTGCTGATGGAGATGCTTCTCATCGGAAAATATTTGTTCATGGTTTGGGATGGGATACTACTTCAGCAACGCTGATTAACGCGTTTTCGCAGTACGGTGAAATTGAGGATTGTAAAGCTGTTACGGATAAGGTTTCAGGGAAATCTAAGGGTTATGGATTTATTTTGTTTAAGAAAAGGAGTGGAGCGAGGAATGCGTTGAAGGAGCCGCAGAAGAAGATTGGGAATAGGATGACGGCGTGTCAGCTGGCGTCTATTGGGCCCGTGCAGCAAACTCCGGTGGTGGCAGCGGTGCCGGCGCCGTTGGTGGTGCCGGGTTCGGAGTATACGCAGAGGAAGATTTATATTAGTAATGTTGGACCTGATTTGGATGCACAGAAGCTGTTTGGTTTTTTTTCGAGATTTGGAGAGATTGAGGAAGGACCGTTGGGGCTTGATAAGGTGACGGGGAAGCCGAAAGGGTTTTGTTTGTTTGTGTATAAGAGTGCTGAGAGTGCGAGGAGGGCGTTGGAGGAGCCGCATAAGGAGTTTGAAGGGCATATTTTGCATTGTCAGAAGGCGATTGATGGTCCTAAGCCGACAAAGATACAACATCAGCCACAGCAGCAACAGCAACATGTGAATTCGGTGAATCATTTGAACCAATTGAATCCATTGAGTCAGAGGACGCAGTTTCAGAGACATGATAATGTTGGATTTATTGGTGGAAGTAGTGTTGCAGTTAGCCAACCAGGGCACTTAATGGCACCGGCAGGACCAGTAGCCGGGTACAATCATGCGGCTGCTAGTGCTTCTGCTGCACAGGGGCTGAACCCTGCGCTGACTCCTGCACTTGGACAGGCGCTGACAGCGTTGCTTGCTTCTCAGGGTGCTACGTTGGGGCTGGGTAATTTACTGGGGAGTCTTGGAGCAAGTAGTGCGGTTAATCCTGGTGTTCCTGCTGCTGGTCATGGAGTTCAGAGTGGATACAGTGCTCAGCCTACCATAAGTCCAACCGTAATGGGAGCGTATGGGAATGCTGTACCACATGCTGGATTGCAGGTGCTATATCCGAACCAGCAGCTTGGACAGGGTGGTTCTGGAAGAGGGCAATATGGTGGTGCCGCACCTTATCATTAG 1476 0.4892 MVRKRKLVKASQQEEPPLKQHQPEPKPEPVPEPEPEPYIPGEEYEEVEEEVEYEEVEEEVEEEEEEEEEEEEEEQQQIQVEEDDEPIQKLLEPFTKEQISSLLCEAASKHRDVADRIRKIADGDASHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKKRSGARNALKEPQKKIGNRMTACQLASIGPVQQTPVVAAVPAPLVVPGSEYTQRKIYISNVGPDLDAQKLFGFFSRFGEIEEGPLGLDKVTGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPKPTKIQHQPQQQQQHVNSVNHLNQLNPLSQRTQFQRHDNVGFIGGSSVAVSQPGHLMAPAGPVAGYNHAAASASAAQGLNPALTPALGQALTALLASQGATLGLGNLLGSLGASSAVNPGVPAAGHGVQSGYSAQPTISPTVMGAYGNAVPHAGLQVLYPNQQLGQGGSGRGQYGGAAPYH 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02653 491 Gene3D - 41 211 IPR012677 -
Mepo3g02653 491 MobiDBLite consensus disorder prediction 1 84 - -
Mepo3g02653 491 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 231 320 IPR000504 GO:0003723
Mepo3g02653 491 MobiDBLite consensus disorder prediction 38 81 - -
Mepo3g02653 491 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 128 240 IPR000504 GO:0003723
Mepo3g02653 491 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 233 301 IPR000504 GO:0003723
Mepo3g02653 491 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 130 196 IPR000504 GO:0003723
Mepo3g02653 491 SMART rrm1_1 232 304 IPR000504 GO:0003723
Mepo3g02653 491 SMART rrm1_1 129 201 IPR000504 GO:0003723
Mepo3g02653 491 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 46 319 - -
Mepo3g02653 491 Gene3D - 223 326 IPR012677 -
Mepo3g02653 491 Coils Coil 44 84 - -
Mepo3g02653 491 SUPERFAMILY RNA-binding domain, RBD 126 210 IPR035979 GO:0003676
Mepo3g02653 491 SUPERFAMILY RNA-binding domain, RBD 211 321 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02653 Mepo-Chr3 36435011 36441241 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02653 217 310 C2H2 Transcription Factor Family AT2G19380 32.979 2.16e-10 61.2