Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02649 ATGTATCATGCAAAGAAGTTTCCGGAGGAGACGATGATGCTACATAAATCTCAAGGTGGTGGTGGTGGTGAACAGTTTGCAACTGGTGGGGGTTTGAATGGATCTGCTGTGAAAAATGTTCAACCTGCTGGGGGTGGTGGGAAGCAGCGTTTGCGTTGGACGTCGGATCTTCATGACCGTTTTGTCGATGCTATTACACAGCTTGGTGGACCAGATAGAGCAACACCGAAAGGTGTTTTGAGAGTGATGGGCGTGCCTGGACTGACCATTTATCATGTTAAAAGCCATTTACAGAAGTATCGCCTGGCAAAGTACTTGCCTGAATCACCAGGTGATGGTAAAGATTCTAAAGATGAGAAAAGGAATTCTGGAGACAGCATTTCTGGCGCTGATTCTTCCCCGGGTTTGCAAATCAATGATGCTCTACGAATGCAGATGGAAGTTCAAAAACGTCTGCATGAACAGCTTGAGGTTCAAAAGCAATTACAAATGAGAATTGAAGCCCAGGGTAAATACTTGCAGAAGATCATAGAGGAACAGCAGAAATTAGGCAGTACCTTAGCAGCATCGGAAACACTTCCGTTGTCCCATGATAAGCAAAACCAGCCCCTATCAGAGCCTTCTGGGTCTAGTGATGCCCTTGCAGGCACTTTTTCTCCCCATAAAAAACAGAGAATTGATGAAGGTTCAAAGGATGACTTCACTGCATCCCAAGTTACAAGAAAGACTGCTCAGAAGAATGATTGTAATGTTGGTCCTTTGGATCCAAACTTGTATGAAGATGACGCTGGCTATGGATTTGATTTGGAGACAGAAAATGACGACGGCAATGAGAGCGAGCAGTAA 846 0.448 MYHAKKFPEETMMLHKSQGGGGGEQFATGGGLNGSAVKNVQPAGGGGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPGDGKDSKDEKRNSGDSISGADSSPGLQINDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGSTLAASETLPLSHDKQNQPLSEPSGSSDALAGTFSPHKKQRIDEGSKDDFTASQVTRKTAQKNDCNVGPLDPNLYEDDAGYGFDLETENDDGNESEQ 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02649 281 SUPERFAMILY Homeodomain-like 48 102 IPR009057 -
Mepo3g02649 281 Pfam Myb-like DNA-binding domain 51 101 IPR001005 -
Mepo3g02649 281 Pfam MYB-CC type transfactor, LHEQLE motif 136 182 IPR025756 -
Mepo3g02649 281 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 48 105 IPR017930 -
Mepo3g02649 281 FunFam Myb family transcription factor 47 105 - -
Mepo3g02649 281 MobiDBLite consensus disorder prediction 265 281 - -
Mepo3g02649 281 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 47 221 IPR044848 GO:0003700
Mepo3g02649 281 MobiDBLite consensus disorder prediction 106 137 - -
Mepo3g02649 281 MobiDBLite consensus disorder prediction 221 235 - -
Mepo3g02649 281 NCBIfam myb-like DNA-binding domain, SHAQKYF class 48 103 IPR006447 GO:0003677
Mepo3g02649 281 Coils Coil 139 159 - -
Mepo3g02649 281 MobiDBLite consensus disorder prediction 15 34 - -
Mepo3g02649 281 MobiDBLite consensus disorder prediction 108 125 - -
Mepo3g02649 281 Gene3D - 47 106 - -
Mepo3g02649 281 MobiDBLite consensus disorder prediction 191 281 - -
Mepo3g02649 281 MobiDBLite consensus disorder prediction 191 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02649 Mepo-Chr3 36402890 36407924 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02649 25 196 G2-like Transcription Factor Family AT3G13040 49.153 9.04e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo3g02649 Myb_DNA-binding 2.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02649 - - tpra:123889278 481.1