Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02611 ATGACTTCACAACAGTTCAACAATGGTGATATGAGTCTTTTTCCTTTAGCTCCTATTCCTTCAACTCACCTTGTTGATTCCAAAGCTCATCCTTTGACAAACCCTGAAAAGGGTCTTCAGATTATGAGACCCTCAATGTTTAAGTCCAAAGTGGAAGATGGGTGCTTTGAGGTTCAAGGAAAAAACTTGTCTTTGAAACTTGGTAATGAAGTAGAAGATAAAAGCACTGTTTCTGTGAAAGTTGGGTACTCCAAGCTTTGTTCTAGAGGTCATTGGAGACCAATAGAAGATGCAAAACTTAAGGAGCTTGTTGCTGAATATGGTCCTCAAAATTGGAACTTGATTGCAGAACATCTTGAAGGAAGATCAGGAAAAAGTTGTAGATTGAGGTGGTTCAATCAGCTAGACCCAAGAATCAACAAAAAAACCTTTTCTGAGGAGGAAGAAGAAAGACTCTTAGCTGCTCATAAAATGTATGGTAACAAATGGGCAATAATTGCCAGACTTTTTCCAGGGAGGACAGATAATGCAGTGAAGAATCATTGGCATGTGATCATGGCTAGAAGACATAGGGAACAGTGTACTGTGTATAGAAGGAGAAAGCCAGTTGTTGTTGAAAGTGTTTCAAAGGATTTAAAATTAAGTCTTTCAAACAATGCAGCTAGTGATTCAACTATCTCAAGCACCATTGATGGAAATGTCTCAACTTGCACTAATCTCTCACTCACTCCTTCTTCACCTAAACTAAGTCCTCAACTGTTTGATAAACTAGTTGTTCCAGTTGAGAATCATCAAGGCTATGGATCACTAATGGATAAATCTAGAGAAAGTGTGGTGGCAACAAGGGATGTGAATTTTGACAAGTATTTTGGAGGTTGTAAGAAGCATGACCAAGTGGAAAAGCTGAAGCTAATAGATGTGGTGGTGGACCAGTCCAATTTTTCAGATTCAAACTCTGAAGTATCAGTATCTGAGTCAGTTACCACCAATAGGTCCAATATCTCAATTTCTGGTGAAAGTGAAAATGTTGGTGTTAAGATAAACATGTTACTACCATTCATTGATTTTCTTGGAGTAGGAGCTATACAAAGCTAA 1095 0.3817 MTSQQFNNGDMSLFPLAPIPSTHLVDSKAHPLTNPEKGLQIMRPSMFKSKVEDGCFEVQGKNLSLKLGNEVEDKSTVSVKVGYSKLCSRGHWRPIEDAKLKELVAEYGPQNWNLIAEHLEGRSGKSCRLRWFNQLDPRINKKTFSEEEEERLLAAHKMYGNKWAIIARLFPGRTDNAVKNHWHVIMARRHREQCTVYRRRKPVVVESVSKDLKLSLSNNAASDSTISSTIDGNVSTCTNLSLTPSSPKLSPQLFDKLVVPVENHQGYGSLMDKSRESVVATRDVNFDKYFGGCKKHDQVEKLKLIDVVVDQSNFSDSNSEVSVSESVTTNRSNISISGESENVGVKINMLLPFIDFLGVGAIQS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02611 364 SUPERFAMILY Homeodomain-like 89 182 IPR009057 -
Mepo3g02611 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 135 IPR017930 -
Mepo3g02611 364 PANTHER MYB PROTEIN-RELATED 89 250 - -
Mepo3g02611 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 136 190 IPR017930 -
Mepo3g02611 364 SMART sant 88 137 IPR001005 -
Mepo3g02611 364 SMART sant 140 188 IPR001005 -
Mepo3g02611 364 CDD SANT 92 133 IPR001005 -
Mepo3g02611 364 Gene3D - 142 201 - -
Mepo3g02611 364 FunFam MYB transcription factor 89 140 - -
Mepo3g02611 364 CDD SANT 152 183 IPR001005 -
Mepo3g02611 364 ProSiteProfiles Myb-like domain profile. 89 135 IPR001005 -
Mepo3g02611 364 Pfam Myb-like DNA-binding domain 141 184 IPR001005 -
Mepo3g02611 364 Pfam Myb-like DNA-binding domain 89 135 IPR001005 -
Mepo3g02611 364 Gene3D - 89 140 - -
Mepo3g02611 364 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02611 Mepo-Chr3 36051826 36054027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02611 84 255 MYB Transcription Factor Family AT5G17800 60.870 3.55e-72 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo3g02611 Myb_DNA-binding 8.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02611 K09422 - gmx:100791795 379.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02611 3 36051826 36054027 Mepo3g02611 3 36051826 36054027 ECH