Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02608 ATGACAGACCCTGCATTATCCATCTACAATTTCCTGTCAAGAGAAGGTGCAAAAAGACATTACCCACCTCTACCACCACCTTCAACACGCACTTTTCAGTGCCACTTCTGCCACCGCAAGTTCTACTCTTCTCAAGCTCTTGGTGGCCACCAGAACGCACACAAGCTAGAGAGAGCTGCTGCAAGAAGATCAACCAAGCCTCGCCATACTTTTCATCATAACAATAATAACGGGTCCTTTCAGTCTTCTTCTATCATAATCACTGACCTCAGGCCCAGGCCCAGGCCCAAGCCCGAAATAGAACATGCTCGTTTCTTCCACAACTACCCCTTGCTAGAAGTTGAGCCTTTTCATCAGCTCCATGCTGGGACTTCCATAATTTCTCACGATACTACTCCTCCTACTGAACCTTCTGATCATGCCAATCTTGACCTCACCCTTCGTTTATGA 450 0.4711 MTDPALSIYNFLSREGAKRHYPPLPPPSTRTFQCHFCHRKFYSSQALGGHQNAHKLERAAARRSTKPRHTFHHNNNNGSFQSSSIIITDLRPRPRPKPEIEHARFFHNYPLLEVEPFHQLHAGTSIISHDTTPPTEPSDHANLDLTLRL 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02608 149 ProSitePatterns Zinc finger C2H2 type domain signature. 34 54 IPR013087 -
Mepo3g02608 149 PANTHER ZINC FINGER PROTEIN 4-LIKE 22 149 - -
Mepo3g02608 149 Gene3D Classic Zinc Finger 24 85 - -
Mepo3g02608 149 MobiDBLite consensus disorder prediction 126 149 - -
Mepo3g02608 149 SUPERFAMILY beta-beta-alpha zinc fingers 29 59 IPR036236 -
Mepo3g02608 149 ProSiteProfiles Zinc finger C2H2 type domain profile. 32 59 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02608 Mepo-Chr3 36007539 36007988 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02608 30 81 C2H2 Transcription Factor Family AT5G57520 59.615 3.85e-14 63.9