Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02576 ATGGCCTCTGTGTTTCTTGTGTTGGTTACTATTTTACTTTCTATAAATCATTCAGAACAGCTTCAATCCTCACACACTCAAACCCTCCTAAGAATTCAACAGCTATTGAATTTTCCTTCTGCATTAAGAAATTGGAATAACTCCACAGATTTTTGCAACACAGATTCAAACTCTTCGCTCACTGTAGTATGCTATGAAGACACAATAACTCAACTTCACATAATAGGTGAAGGAAAAACTCCACCTCTCCCTAAAAATTTCTCGATAGATTCATTTGTCACAACACTAGTAAAGCTTCCAAGTTTGAAAGTCCTCACATTGGTTTCTCTTGGTATATGGGGTTCATTGCCGGGTAAAATAGCTCGGCTTTCTTCGTTGGAAATAGTTAATATGAGTTCGAATCATCTCTATGGTTCGATACCTAAAGAACTCTCGTCACTTTCAAATCTTCAGACACTCATTCTTGACAGCAACATGTTTTCTGGTCAGGTTCCTGTTTGGATTGACTTGCTTTCAGCCTTAACTGTATTGAGTTTGAAAAACAATTTGTTCAACGGATCACTACCGAATTCGGTTAGTAACTTGGAGAATTTGAGAATTCTTTCACTTTCTCATAACAAGTTATATGGTGTAGTACCTGATTTGAGTCATTTGCGAAATCTTCAAGTACTTGAATTGGATGATAATGCTTTTGGGCCTCAGTTTCCTAAGTTTGGTAACAAGTTGGTTACTATAGTGCTAAGAAATAACATGTTCAGGTCTGGCATTCCTGCTGATGTGAGCTCATATTATCAGCTCGAGCAATTTGATATCTCGTCAAATACGTTTGTAGGGCCGTTCCAACCAGCATTGTTGTTGCTTCCTTCTATTGCATACCTCAACATTTCTCGGAACAAATTAACCGGAATGCTCTTTGAGAATCTGTCTTGTAATTCTGAGCTTGAAGTTGTTGATTTATCGTCGAATCTTTTGACTGGGAGCTTACCTAAATGTTTAGTTTCAAATTCTAGTGATAGAACTGTTTTGTATGCTAGAAATTGTCTCGAGACAGCGAATCAAAATCAGCAGCCGCCGCCTTTTTGTCACACGGAAGCCTTAGCTGTGGGAATATTGCCTGATAGAAAGAACAAAAAACAAGTATCAAAGGTAGTTCTTACCCTTGGTATAGTAGGTGGAACTCTTGGAGGAGTAGCACTTGTTTTGCTGATTTTGTTTATTGTTAGAAGAGGAAATGCTAGAAGCAAAACGAAGAATCCTCCGACAAGATTAATATCAGAGAATGCCGCTTCTGGATACACCTCTAAGTTGCTTTCTGATGCAAGATACATATCTCAAACAAAGAAGTTTGGAGCACTTGGCCTGCCAACCTATAGAAGTTTTTCATTGGAAGAGATTGAGGCAGCTACAAACAACTTTGACACAGCTTCTTTAATGGGTGAAGATTCTTATGGAGAGATGTACAGAGGTCAGTTGAAGAATGGTTCAATTGTTGTTATTAGATGTATCAAAATGAAAAAAAGATACAGCACTCAAAATTTCATGCACCACATGGAGCTTATATCGAAACTTAGGCATCGTCATTTAGTCAGCGCTCTTGGACACTGCTTCGAATGTTCTTTAGAAGATTCAAGTGTCAGCAAAATATTTCTTGTCTTTGAATATGTACCAAATGGTACACTGAGGAGCTGGACATCTGATGGCCACACTGGAAAATCTCTGAATTGGACCCAACGCATAGGAGCTGCAATTGGAGTAGCAAAGGGAATCCAATGTCTGCATACAGGAATTGTCCCTGGTGTATATTCCAACAATATCAAAATAGAAGATATTTTATTGGATCACAATCTTGTTGCAAAAATTAGCAGTTATAATTTACCTTTGTTATCTAACATAGGAAAGGTTCGGCGTGGAAATTCTTCCGATGGATCCAAACATTCTAGTATCAATAAAAGTGGAAAACATGAAGATAAGTGTGATATATATGACTTTGGAGTAATACTACTGGAAATCATTCTAGGAAGGACAATAAAGACCACAAATGATGCAGAAGCTTTTAAGGATCTGTTGCAAACAAGCTTAGGAGCTGATGAGGACGCTCGGAGGAGCATTGTTGATCCAGCAATCCGCAAGGCGTGCTTGGAACAATCACTGAAGACAATGACGGAGATATGTGTGAGGTGTATGATTAAAGAACCTGCAGAAAGGCCCTCCATAGAGGATGTTTTGTGGAATTTGCAGTTTGCAGCTCAAGTACAGGATGCTTGGAGAGGGGATTCTCAAAGTAGTGAGGGGTCACCAGGTTCGCCTTTAGGGCCTCAAAGAACAGCCTTCCATTAA 2337 0.3894 MASVFLVLVTILLSINHSEQLQSSHTQTLLRIQQLLNFPSALRNWNNSTDFCNTDSNSSLTVVCYEDTITQLHIIGEGKTPPLPKNFSIDSFVTTLVKLPSLKVLTLVSLGIWGSLPGKIARLSSLEIVNMSSNHLYGSIPKELSSLSNLQTLILDSNMFSGQVPVWIDLLSALTVLSLKNNLFNGSLPNSVSNLENLRILSLSHNKLYGVVPDLSHLRNLQVLELDDNAFGPQFPKFGNKLVTIVLRNNMFRSGIPADVSSYYQLEQFDISSNTFVGPFQPALLLLPSIAYLNISRNKLTGMLFENLSCNSELEVVDLSSNLLTGSLPKCLVSNSSDRTVLYARNCLETANQNQQPPPFCHTEALAVGILPDRKNKKQVSKVVLTLGIVGGTLGGVALVLLILFIVRRGNARSKTKNPPTRLISENAASGYTSKLLSDARYISQTKKFGALGLPTYRSFSLEEIEAATNNFDTASLMGEDSYGEMYRGQLKNGSIVVIRCIKMKKRYSTQNFMHHMELISKLRHRHLVSALGHCFECSLEDSSVSKIFLVFEYVPNGTLRSWTSDGHTGKSLNWTQRIGAAIGVAKGIQCLHTGIVPGVYSNNIKIEDILLDHNLVAKISSYNLPLLSNIGKVRRGNSSDGSKHSSINKSGKHEDKCDIYDFGVILLEIILGRTIKTTNDAEAFKDLLQTSLGADEDARRSIVDPAIRKACLEQSLKTMTEICVRCMIKEPAERPSIEDVLWNLQFAAQVQDAWRGDSQSSEGSPGSPLGPQRTAFH 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02576 778 Gene3D Ribonuclease Inhibitor 22 239 IPR032675 -
Mepo3g02576 778 ProSiteProfiles Leucine-rich repeat profile. 197 219 IPR001611 GO:0005515
Mepo3g02576 778 ProSiteProfiles Protein kinase domain profile. 472 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02576 778 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 445 554 - -
Mepo3g02576 778 Pfam Protein tyrosine and serine/threonine kinase 476 742 IPR001245 GO:0004672|GO:0006468
Mepo3g02576 778 SUPERFAMILY L domain-like 32 348 - -
Mepo3g02576 778 SMART LRR_typ_2 195 218 IPR003591 -
Mepo3g02576 778 SMART LRR_typ_2 123 147 IPR003591 -
Mepo3g02576 778 SMART LRR_typ_2 171 194 IPR003591 -
Mepo3g02576 778 SUPERFAMILY Protein kinase-like (PK-like) 454 747 IPR011009 -
Mepo3g02576 778 MobiDBLite consensus disorder prediction 755 769 - -
Mepo3g02576 778 Gene3D Phosphorylase Kinase; domain 1 436 554 - -
Mepo3g02576 778 Gene3D Transferase(Phosphotransferase) domain 1 555 761 - -
Mepo3g02576 778 PANTHER UNNAMED PRODUCT 90 677 - -
Mepo3g02576 778 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 22 239 - -
Mepo3g02576 778 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 555 761 - -
Mepo3g02576 778 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase isoform A 240 357 - -
Mepo3g02576 778 Gene3D Ribonuclease Inhibitor 240 356 IPR032675 -
Mepo3g02576 778 MobiDBLite consensus disorder prediction 755 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02576 Mepo-Chr3 35770721 35775813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02576 38 766 Miscellaneous Gene Families AT3G03770 63.215 0.0 902
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Mepo3g02576 PK_Tyr_Ser-Thr 7.9e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02576 - - gmx:100807539 1234.17