Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02533 ATGAGTGAAGAAACGAGTGAAGAATCTACCGGCAGAAGTAGGAATCATCAAATATTTCAAAGGCTAGGAGTAGAAGAGGATGAGTCAACTGAAGGAGAGGGAAGTGACACTAGTAGCTATACATCTGAGCAACTCCCTGAGACTGATGATGATGATACATTTTCCAGCAAAGATATGTTGGAATGTAACTTTTGCTATAAATCTTTAAGATTTGTTGTCTTTGAGTGTATCAATGGGCATATTCTCTGCGCCTCATGCAGTAGCAAAACCAATTCGTGTGTTATTTGTGAACTTTACACTCAACATAGTCATGTGAAAGTAGCATGTGATTATGAACCATACGGTTGCAAGGAGGTGGTAATGTACACTCAAAGATATGAACATGTTAATTCATGTCATTTTTCTCCATGTCTATGTCCACAAAGAAATTGCAGCTTCCAAGCCAATTCAAGAGCATTAGGAGAACACTTTATGATAAATCATCCACTTCGCATACCACCATTTAAATATGATCAAGTTTTCTTTACATATGTGAACATAAATGACGATGTCACTATTCTTCAAGAGATAAGTGATGGAGAGCTATTTGTCATCACATGTAAGACTCAATATGTTTTCAAAATGTTAAGTCTTTATCATATTGGGCCCACTAGACGCAAGCCAGAGTATGCTTTTGAAATGTTGGTTCTACCTCATGAAAAAAATAGTAATGGTGTTCTACAACTGAAATCTGAAGCAGTGAACGTCGACGACCGCACATATCCTTCATCAAGTTCAATTTATGTTTCATATGGTTACTTTAAAGATGGACGTCTCTCTATAAAAGTTCGAATAAGTAAGATTGGAGTCAATCTTTAG 858 0.3648 MSEETSEESTGRSRNHQIFQRLGVEEDESTEGEGSDTSSYTSEQLPETDDDDTFSSKDMLECNFCYKSLRFVVFECINGHILCASCSSKTNSCVICELYTQHSHVKVACDYEPYGCKEVVMYTQRYEHVNSCHFSPCLCPQRNCSFQANSRALGEHFMINHPLRIPPFKYDQVFFTYVNINDDVTILQEISDGELFVITCKTQYVFKMLSLYHIGPTRRKPEYAFEMLVLPHEKNSNGVLQLKSEAVNVDDRTYPSSSSIYVSYGYFKDGRLSIKVRISKIGVNL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02533 285 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 102 157 IPR013083 -
Mepo3g02533 285 ProSiteProfiles Zinc finger SIAH-type profile. 104 162 IPR013010 GO:0008270
Mepo3g02533 285 Pfam Seven in absentia protein family 102 203 IPR018121 GO:0005737|GO:0006511|GO:0007275
Mepo3g02533 285 MobiDBLite consensus disorder prediction 1 52 - -
Mepo3g02533 285 SUPERFAMILY TRAF domain-like 105 232 - -
Mepo3g02533 285 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 25 281 IPR044286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02533 Mepo-Chr3 35390122 35392075 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02533 58 161 C3H Transcription Factor Family AT2G41980 27.350 4.99e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02533 K04506 - cave:132183012 134.035