Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02529 ATGCCAGAGTTGAGAAGTGGAGCAAGAAGGTCAAAGCGGCTTGGAGATCTTCAGCCTGGTCCACAACCTGTTGATCAAGGAGAGAATTGGGCAGAGCCTGCACAGAACAGAACTAGGAGGAGAGTTGGAGGTGGAAGAGGAAGAGGTGGTAATGCCACAGGTTTAGGTAAAGGGTCTTCACCAGCTGTACCCACGAGACGAACTGCAGCTGGTAGAGGCCGTGGAGCAAGATTGATTGATTTGGATCCTCAACCTTGTGACCTCCTTCCAGAACCTGTTGCATTAAGGGCTCAGGAACCTGTTTACAATAACGTAGAGGTAGTGGCCAATAATAACATTGCGATGGAGGGTGGAAGTGGTGATAAAGGGGTGGCAGCTGAAGAAGATGCAAGCACAACCCCTGTCCCTGAGAGGGTGCAAGTTGGCAACTCTCCTGTATATAAGACAGAAAGGAAGTTGGGTAAGGGTGGTTTTGGCCAAGTTTATGTTGGCAGAAGGGTTAGTGGTGGCTCTGATCGAGTAGGTCCTGATGCTATTGAGGTTGCACTCAAGTTTGAGCATAGAAACAGTAAAGGTTGTAATTATGGGCCTCCTTATGAGTGGCAAGTTTACAGTAATCTGAATGGCTGTTATGGCATTCCCGGGGTTCATTACAAGGGTCGACAAGGAGATTTCTACATTTTGGTGATGGACATACTTGGGCCCAGCCTTTGGGATGTATGGAATTCTCTTGGTCAATCGATGTCACCAAGTATGGCTGCTTGCATTGCAGTGGAGGCAATATCAATTCTTGAGAAGCTCCATTTGAAAGGGTTTGTGCACGGAGATGTAAAACCAGAAAACTTTTTGCTTGGTCAACCTGGAACGGCTGATGATAAGAAGTTATATCTTATTGATCTTGGTTTAGCTTCTAAATGGAAGGATGCATCATCTGGTCAACACGTTGAATATGATCAGAGACCTGATATATTCAGGGGAACGATAAGATATGCTAGTGTACATGCACATTTAGGTAGGACTGGCAGTCGAAGGGATGATCTTGAGTCACTGGCATACACATTGATATTTCTCATAAAAGGGAGATTGCCGTGGCAGGGTTATCAGGGTGACAATAAAAGTTTTCTTGTTTGTAAGAAAAAAATGTCCACTTCTGCGGAGTTGATGTGTTGCTTTTGTCCCGCCCCATTTAAGCTGTTCCTAGAAGCAGTTACTAACATGAGATTTGATGAGGAGCCAAATTATTCCAAGCTTATATCACTTTTTGACAGCTTGATCGAACCATGCACTCCATTGAGACCTATTAGAATTGATGGAGCTTTAAAGGTTGGTCAAAAACGAGGAAGGATGCTTATTAATCTGGAAGAAGATGAGCAGCCTAAGAAAAAAGTGCGATTGGGTAGTCCTGCTACTCAGTGGATATCAGTGTATAATGCACGCCGTCCAATGAAGCAGAGATATCACTATAACGTAGCAGACAATAGGCTCCGGCAGCATGTAGACAAGGGCATTGAGGATGGGTTGTATATAAGCTGTGTGGCCTCTTCAGCGAATTTGTGGGCCCTGATCATGGATGCAGGAACAGGTTTTTCTTCCCAAGTTTATGAGTTGTCACCGGCCTTCCTGCACAAGGATTGGATTATGGAGCAATGGGAGAAAAATTACTATATCAGTTCAATAGCTGGTGCAGTTAATGGCAGTTCCTTGGTTGTCATGTCCAAAGGAACTCCTTATACACAGCAGTCCTACAAAGTGAGCGAATCATTTCCTTTCAAATGGATAAACAAGAAGTGGAAAGAAGGGTTCCATGTTACCTCCATGACTACTGCTGGCAGTCGTTGGGGCGTTGTTATGTCCAGGAATGCTGGGTATTCTGATCAGGTTGTGGAGCTGGACTTTTTGTATCCAAGTGAAGGAATCCATCGAAGATGGGAAAATAATTACCGGATTACTTCTATGGCTGCTACTAATGATCAGGCAGCCTTCATACTTAGCATACCAAAACGCAAATTACTTGACGAGACTCAAGAGACTTTGCGGACATCGGCTTTCCCCAGCACCCATGTAAAGGAGAAATGGTCAAAGAATCTCTATATTGCCTCGATATGTTATGGGCGAACTGTTTGCTAG 2127 0.4457 MPELRSGARRSKRLGDLQPGPQPVDQGENWAEPAQNRTRRRVGGGRGRGGNATGLGKGSSPAVPTRRTAAGRGRGARLIDLDPQPCDLLPEPVALRAQEPVYNNVEVVANNNIAMEGGSGDKGVAAEEDASTTPVPERVQVGNSPVYKTERKLGKGGFGQVYVGRRVSGGSDRVGPDAIEVALKFEHRNSKGCNYGPPYEWQVYSNLNGCYGIPGVHYKGRQGDFYILVMDILGPSLWDVWNSLGQSMSPSMAACIAVEAISILEKLHLKGFVHGDVKPENFLLGQPGTADDKKLYLIDLGLASKWKDASSGQHVEYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMSTSAELMCCFCPAPFKLFLEAVTNMRFDEEPNYSKLISLFDSLIEPCTPLRPIRIDGALKVGQKRGRMLINLEEDEQPKKKVRLGSPATQWISVYNARRPMKQRYHYNVADNRLRQHVDKGIEDGLYISCVASSANLWALIMDAGTGFSSQVYELSPAFLHKDWIMEQWEKNYYISSIAGAVNGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWENNYRITSMAATNDQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWSKNLYIASICYGRTVC 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02529 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Mepo3g02529 708 Pfam Protein kinase domain 147 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02529 708 SUPERFAMILY Protein kinase-like (PK-like) 147 434 IPR011009 -
Mepo3g02529 708 Gene3D Transferase(Phosphotransferase) domain 1 114 464 - -
Mepo3g02529 708 ProSitePatterns Protein kinases ATP-binding region signature. 153 184 IPR017441 GO:0005524
Mepo3g02529 708 FunFam Casein kinase 1-like protein 119 467 - -
Mepo3g02529 708 ProSiteProfiles Protein kinase domain profile. 147 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02529 708 MobiDBLite consensus disorder prediction 1 77 - -
Mepo3g02529 708 CDD STKc_CK1 147 421 - -
Mepo3g02529 708 PANTHER CASEIN KINASE-RELATED 147 676 - -
Mepo3g02529 708 SMART serkin_6 147 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02529 Mepo-Chr3 35362604 35369205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02529 252 421 MAP Kinase Kinase Kinase AT3G27560 22.674 6.86e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Mepo3g02529 Pkinase 9.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02529 - - tpra:123890076 1342.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02529 3 35362604 35369205 Mepo3g02529 3 35362604 35369205 ECH
Mepo3g07644 3 89714311 89719563 Mepo3g02529 3 35362604 35369205 PCT