Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02523 ATGGCAATTGCACGCACTGGAGTTTACGTTGACGACTATTTGGAATATGCCAACACATTGCCCGCTGAGCTTCAGAGACTTCTCAACACCGTTCGTGAACTCGATGAACGATCCCAATCTATGATAAACCAGACAAGGCAGCAGACAAAGTACTGTATGGGGTTTTCATCTCATGGCTCTAAGAAGGGTAATCATAATTATAATAACAATTATATGAATGAGGATGATGATGTTTCCATTGAGAAAATGCGAAAAGAAATTGAGGCGAATCAGGATAGTGCATTAAGTTTATGTACTGAGAAGGTTTTGTTGGCTAGGCAAGCATATGAACTGATAGACAGCCATGTAAAACGACTTGATGAGGATTTAACCTACTTTGCTGAAGATTTAAAGCAAGAGGGGAAAATATCACAAGACGAGCCAGCAATTCTTCCCCCATTGCCTATTGTCCCTAAACCTGAAAAGCGCAGGCACACATATGGTACACCTCAATCGAAGAGACTTGATTACAGGGAGAGAGACTGGGATAGAGACTTTGAGCTAATGCCTCCACCAGGAAGCCATAAGAAGGACTATATGATCCCTATGGATATTGATCAACCCATTGATCCAAATGAACCTACATACTGTGTTTGTCATCAGGTATCTTTTGGAGATATGATTGCTTGTGACAACGAAAATTGCCGAGGAGGTGAATGGTTCCACTATTCATGTGTTGGCCTAACACAAGAGACAAGGTTCAAGGGAAAGTGGTATTGCCCAACTTGCAGATTACTACCACAATGTCAATGA 792 0.4154 MAIARTGVYVDDYLEYANTLPAELQRLLNTVRELDERSQSMINQTRQQTKYCMGFSSHGSKKGNHNYNNNYMNEDDDVSIEKMRKEIEANQDSALSLCTEKVLLARQAYELIDSHVKRLDEDLTYFAEDLKQEGKISQDEPAILPPLPIVPKPEKRRHTYGTPQSKRLDYRERDWDRDFELMPPPGSHKKDYMIPMDIDQPIDPNEPTYCVCHQVSFGDMIACDNENCRGGEWFHYSCVGLTQETRFKGKWYCPTCRLLPQCQ 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02523 263 Pfam Inhibitor of growth proteins N-terminal histone-binding 9 125 IPR024610 -
Mepo3g02523 263 FunFam PHD finger protein ING 201 259 - -
Mepo3g02523 263 Pfam PHD-finger 209 257 IPR019787 -
Mepo3g02523 263 SMART PHD_3 209 257 IPR001965 -
Mepo3g02523 263 Coils Coil 24 44 - -
Mepo3g02523 263 ProSiteProfiles Zinc finger PHD-type profile. 207 259 IPR019787 -
Mepo3g02523 263 MobiDBLite consensus disorder prediction 141 163 - -
Mepo3g02523 263 SUPERFAMILY FYVE/PHD zinc finger 184 258 IPR011011 -
Mepo3g02523 263 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 197 258 IPR013083 -
Mepo3g02523 263 CDD ING_plant 19 123 - -
Mepo3g02523 263 PANTHER INHIBITOR OF GROWTH PROTEIN 2 257 IPR028651 -
Mepo3g02523 263 Gene3D - 5 124 - -
Mepo3g02523 263 CDD PHD_ING 209 256 - -
Mepo3g02523 263 SMART ING_2 9 126 IPR024610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02523 Mepo-Chr3 35329225 35331942 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mepo3g02523 ING 2.7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02523 - - gmx:100787916 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02523 3 35329225 35331942 Mepo3g02523 3 35329225 35331942 ECH