Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02515 ATGGAAGAACCAATTGTTGTTAACAAAGGTGAAGATCAAGGTCTTGATCTTCCTCCAGGTTTCAGATTCCACCCAACAGATGCTGAGATAATTGTTTGTTATCTCACTGAAAAGGTTAAAAATAGCAAATTCAGTGCAACTGCTATTGGTGAAGCTGATTTGAACAAGTGTGAACCTTGGGATTTACCAAAGAAAGCAAAGATGGGTGAGAAAGAATGGTACTTTTTTTGTCAGAAGGATAGAAAATATCCAACAGGTATGAGAACTAATAGAGCAACTGAATCTGGTTACTGGAAAGCTACAGGAAAAGACAAGGAGATTTATCACAAAGGAAAAGGAATCCAAAACCTTGTTGGTATGAAGAAGACTCTTGTGTTCTATAAAGGAAGAGCTCCAAAAGGAGAGAAGACTAATTGGGTTATGCATGAATTCAGATTGGAAGGCAAATTTGCAACTCATAATCTTCCTAACAAAGAAAAGGATGAATGGGTTGTGTCAAGGGTTTTTCACAAGAACTCAGATGTTAAAAAACCTCAAATTTCATCTGGTCTTTTAAGAATAAACTCAATTGGTCATGATGATCTTCTTGATTATGCTTCACTTCCACCTCTCATGGATCCTTCTTACACAAATGATGAATTCAAGGGAATTACCAATCAACAAATTCCATCAACAAAATCACAATCAGATGGTTATTATCTTCCAAGCTTCTCCATCAACAATAATCAACATCAATTTGTCATCAAGCCAGAAGATAATTACCATAGAATCAACTATGATCATCATGAGATTAATCCAACCATGATGAACTACACTTCCATTTCCAACCAATCCAATCTCAACAACCCACTTGGAAACACACTCTCACAGCCTCAAATCCGAATCCAAAATCCAAACTTGAATTACTTTATGTATCAAAATAGGATGCAAAGTTCCATGCCAACAAATGTTTATGGCTCAGCTCAGAATAATGAATGCAAGGTGGAACAATTCTCTTCAAACCAATCACAAGATACAGGTCTCAGCAATGACACATCATCAGCTGTATCAAAACTAGACATGGAAAGGAATAGGGCATTGTATGATGATCTTGAAGGTCCTTCATCAGTTGCACCTCTCTCAGATTTGGATAGTTTTTGGGACTATTGA 1149 0.3664 MEEPIVVNKGEDQGLDLPPGFRFHPTDAEIIVCYLTEKVKNSKFSATAIGEADLNKCEPWDLPKKAKMGEKEWYFFCQKDRKYPTGMRTNRATESGYWKATGKDKEIYHKGKGIQNLVGMKKTLVFYKGRAPKGEKTNWVMHEFRLEGKFATHNLPNKEKDEWVVSRVFHKNSDVKKPQISSGLLRINSIGHDDLLDYASLPPLMDPSYTNDEFKGITNQQIPSTKSQSDGYYLPSFSINNNQHQFVIKPEDNYHRINYDHHEINPTMMNYTSISNQSNLNNPLGNTLSQPQIRIQNPNLNYFMYQNRMQSSMPTNVYGSAQNNECKVEQFSSNQSQDTGLSNDTSSAVSKLDMERNRALYDDLEGPSSVAPLSDLDSFWDY 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02515 382 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 296 - -
Mepo3g02515 382 FunFam NAC domain-containing protein 100-like 26 175 - -
Mepo3g02515 382 ProSiteProfiles NAC domain profile. 17 171 IPR003441 GO:0003677|GO:0006355
Mepo3g02515 382 Gene3D NAC domain 26 176 IPR036093 GO:0003677|GO:0006355
Mepo3g02515 382 Pfam No apical meristem (NAM) protein 18 146 IPR003441 GO:0003677|GO:0006355
Mepo3g02515 382 SUPERFAMILY NAC domain 15 172 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02515 Mepo-Chr3 35219576 35221809 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02515 1 209 NAC Transcription Factor Family AT5G18270 70.233 6.40e-107 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo3g02515 NAM 1.3e-39 No_clan