Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02513 ATGGGAACCCCACAGACCAATTTGCCACCAGGTTTTAGGTTCCACCCTACTGATGCAGAACTCATTCTTCACTACCTTAGGAAAAAAATTGCCTCCATTCCCTTGCCTGTTTCCATCATTGCTGAAGTTGATATTTATAAGTTGGATCCTTGGGATTTACCAGCTAAGGCTTCATTTGGTGAGAAAGAATGGTACTTTTTTAGTCCTAGAGATAGAAAGTACCCTAATGGTGCAAGGCCAAACAGGGCAGCTGCTTCAGGGTATTGGAAAGCCACTGGCACTGATAAGACCATAGTGGCATCATTGCCATGTGGAGGAGGAAGATCACAAGAGAACATTATTGGTGTCAAAAAGGCTCTTGTTTTTTACAAAGGAAAACCACCAAAGGGTATCAAGACGAATTGGATCATGCATGAATATCGTCTTGTTGACAACAATAAACCTATTAAGCTCAAAGATTCTTCCATGAGGTTGGATGATTGGGTGCTATGCCGAATTTACAAGAAATCAAAATGTGCACTAACTTCAACAGAATCATCAGAAACTATGGTAGGTGAAGTAGAACATGCAGAAGAGACACAATTCCAAGAAACCCTTTTTCCAATCACCAAAAACACAACTTCACCTCTTCAAAACACACTCATGTCTCAAAAATCAGTGTCCTTTTCCAACCTATTAGATGCTATGGACTACTCCATGTTAAGCAGCTTCTTATCTGAAAATTCCAACAACCCATCAGGAATTGGAACAAGTTCAGGTTTCAACACTGAAAATTTTAACCAACAACAATCTTCTCAAATCAACACTAGCAACAATTACATGTCTCAGAAGAATCCTCAATCCAAAACTTTAAAGCACCAGCTTTCAAACATAGATGAGGACATGTTATACCCATCAAAGAAATACTTGAGTTCCTCTTGCAATTTCCCTAACATCAATTCACAGTATGAAAACTACCTTATGAAGCAATCTTTGATGAATCAACAATTGCTTTTAGGTCCTCATCATCAATATCAAGGCTAA 1023 0.3871 MGTPQTNLPPGFRFHPTDAELILHYLRKKIASIPLPVSIIAEVDIYKLDPWDLPAKASFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVASLPCGGGRSQENIIGVKKALVFYKGKPPKGIKTNWIMHEYRLVDNNKPIKLKDSSMRLDDWVLCRIYKKSKCALTSTESSETMVGEVEHAEETQFQETLFPITKNTTSPLQNTLMSQKSVSFSNLLDAMDYSMLSSFLSENSNNPSGIGTSSGFNTENFNQQQSSQINTSNNYMSQKNPQSKTLKHQLSNIDEDMLYPSKKYLSSSCNFPNINSQYENYLMKQSLMNQQLLLGPHHQYQG 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02513 340 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 272 - -
Mepo3g02513 340 Pfam No apical meristem (NAM) protein 9 142 IPR003441 GO:0003677|GO:0006355
Mepo3g02513 340 Gene3D NAC domain 17 173 IPR036093 GO:0003677|GO:0006355
Mepo3g02513 340 ProSiteProfiles NAC domain profile. 8 169 IPR003441 GO:0003677|GO:0006355
Mepo3g02513 340 SUPERFAMILY NAC domain 4 169 IPR036093 GO:0003677|GO:0006355
Mepo3g02513 340 MobiDBLite consensus disorder prediction 248 282 - -
Mepo3g02513 340 FunFam NAC transcription factor 56 17 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02513 Mepo-Chr3 35192198 35194188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02513 4 340 NAC Transcription Factor Family AT3G04070 53.107 2.38e-108 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo3g02513 NAM 3.2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02513 - - tpra:123890056 621.698