Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02470 ATGAGTTTTCAAGATATTCAACATGGCTCCAACCCTCCTTCTCGCAGAACTCAATCACCGTCGCAAGCCGTCGCTGCCGGAATTTTTCAGATCAATACTGCCGTTGGTACTTTCCGACGACTCGTTGATTCCGTTGGAACTGTTAAAGATACTCCAGAACATCGTCAGAAACTGCATAATACAAGACAGAGGATATCGCAGCTTGTGAAGGATACTTCTGCTAAGCTTAAATCTTTGTCTGAATCTAATCGTGATTCTAATGCCAATGCAAATAAGAAAATTGAAGATGCTAAGTTGGCAAGAGATTTCCAAACCACATTGCAAGAATTTCAGAAAGTTCAACAGCTTGCTTCTGAGCGTGAATCAACTTATACTCCTGCTGCTCCCGCTTCTAATTTACCAACAAGCTCTGGCCCTGGTGAACAATCAATTGAGATAGACCCCGAAAGCCAACCTTTGATCAGAGGGCAGATGAGGCAAGAGTTACATCTATTGGATAATGAAATATCCTTCAATGAGGCCATGATTGAAGAAAGAGATCAAGGTCTTAGAGAGATAGAAGAGCAAATTGGAGAAGCAAATGAAATATTCAAGGACCTTGCTGTTTTGGTTCATGATCAGGGGATTGTTATTGATGACATTCAATCAAATATAGATACTTCTGCTGGTGCAACAGTTCAAGCTAAGGCCCAGCTAGCCAAAGCTAACAAAAGTGTGAAATCCAAAAATAAATGGTGTTGGTGGGTGCTTCTGATTTTTGTGGCCGTGCTGGTCATCTTCCTCATTGTACTACTTATTTAG 801 0.412 MSFQDIQHGSNPPSRRTQSPSQAVAAGIFQINTAVGTFRRLVDSVGTVKDTPEHRQKLHNTRQRISQLVKDTSAKLKSLSESNRDSNANANKKIEDAKLARDFQTTLQEFQKVQQLASERESTYTPAAPASNLPTSSGPGEQSIEIDPESQPLIRGQMRQELHLLDNEISFNEAMIEERDQGLREIEEQIGEANEIFKDLAVLVHDQGIVIDDIQSNIDTSAGATVQAKAQLAKANKSVKSKNKWCWWVLLIFVAVLVIFLIVLLI 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02470 266 SMART SynN_4 8 122 IPR006011 GO:0016020
Mepo3g02470 266 Pfam SNARE domain 210 261 IPR000727 -
Mepo3g02470 266 SUPERFAMILY t-snare proteins 19 228 IPR010989 GO:0016020|GO:0016192
Mepo3g02470 266 MobiDBLite consensus disorder prediction 1 22 - -
Mepo3g02470 266 MobiDBLite consensus disorder prediction 118 144 - -
Mepo3g02470 266 Pfam Syntaxin-like protein 25 124 IPR006011 GO:0016020
Mepo3g02470 266 FunFam Syntaxin-22 like 15 128 - -
Mepo3g02470 266 CDD SNARE_Qa 176 234 - -
Mepo3g02470 266 MobiDBLite consensus disorder prediction 118 145 - -
Mepo3g02470 266 MobiDBLite consensus disorder prediction 50 69 - -
Mepo3g02470 266 PANTHER SYNTAXIN 22 254 IPR045242 -
Mepo3g02470 266 Gene3D - 9 131 - -
Mepo3g02470 266 Gene3D - 167 266 - -
Mepo3g02470 266 SMART tSNARE_6 168 235 IPR000727 -
Mepo3g02470 266 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 173 235 IPR000727 -
Mepo3g02470 266 FunFam Syntaxin-22 like 166 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02470 Mepo-Chr3 34717380 34720353 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02470 1 253 SNARE and Associated Proteins AT5G46860 58.366 3.03e-99 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02470 - - gmx:100787141 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02470 3 34717380 34720353 Mepo3g02470 3 34717380 34720353 ECH