Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02461 ATGAGTCCTTTGAAAGGAAAAAAGAAACAAACAACATCAACAAGCAATGAAACAACGACGACGACAACAACAACGACACAAGAACAACAACAGCAGCAGCAACAAACAGCATGGGGAGGAAGATACCTAGGAGTACGAAGAAGACCATGGGGAAGATACGCAGCAGAGATTCGTGATCCTTCAACAAAAGAAAGACACTGGTTAGGAACATTCGACACTGCTGAAGAAGCTGCTTTAGCTTACGACAGAGCCGCACGTGGCATGCGTGGCTCACGTGCAAGAACCAATTTTGTTTACCATGATACCCCTCCTGGTTCTTCTGTTACTCCTATCCTCTCCCCTGACCAACAACAACAACAACCTCAAAGTTTTTACGACCTTTCTTTTGTTCTTCAACCTGAACCGGTTCCTATTCAACAGAACCCGGTTTTGTCTATTGACCCGGTTTCAATCATAACTTCCTCTGGGAGTTACGGTTACGGTGAGGGAAATGATAATAATTATTTCAATAATAAATATAGTCTTCCTCATCAAGTTCCTCTTGATACATTGGAGGCTAGTATTAATAATAATGGAAATTCCTATTTTAACAACGACAATGTTGAGCTTCCTCCATTGCCACCGGATATTACTAGCTCCGCGTGTTATAGTCAGGGTGATTCAGTATTCAACGGAGGCGATCATGGTTATTTTTATTCATCATGGGAGCATAATGCAGCAGAGGATTGTTATAATAATCAAATGTTGGGAACAAATATGGGAGCTGCAGTTACAGAGAATAATATTATGGCAGGTTCTGTTAATGGTACTTTTGATTTTGGGAGCTCTTCATTTTTCTTCTGA 843 0.4093 MSPLKGKKKQTTSTSNETTTTTTTTTQEQQQQQQQTAWGGRYLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARGMRGSRARTNFVYHDTPPGSSVTPILSPDQQQQQPQSFYDLSFVLQPEPVPIQQNPVLSIDPVSIITSSGSYGYGEGNDNNYFNNKYSLPHQVPLDTLEASINNNGNSYFNNDNVELPPLPPDITSSACYSQGDSVFNGGDHGYFYSSWEHNAAEDCYNNQMLGTNMGAAVTENNIMAGSVNGTFDFGSSSFFF 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02461 280 Gene3D AP2/ERF domain 40 99 IPR036955 GO:0003700|GO:0006355
Mepo3g02461 280 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Mepo3g02461 280 PRINTS Ethylene responsive element binding protein signature 64 80 IPR001471 GO:0003700|GO:0006355
Mepo3g02461 280 SUPERFAMILY DNA-binding domain 41 98 IPR016177 GO:0003677
Mepo3g02461 280 CDD AP2 41 97 IPR001471 GO:0003700|GO:0006355
Mepo3g02461 280 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 26 120 - -
Mepo3g02461 280 SMART rav1_2 41 104 IPR001471 GO:0003700|GO:0006355
Mepo3g02461 280 ProSiteProfiles AP2/ERF domain profile. 41 98 IPR001471 GO:0003700|GO:0006355
Mepo3g02461 280 MobiDBLite consensus disorder prediction 1 39 - -
Mepo3g02461 280 FunFam Ethylene-responsive transcription factor 2 41 99 - -
Mepo3g02461 280 MobiDBLite consensus disorder prediction 1 40 - -
Mepo3g02461 280 Pfam AP2 domain 42 90 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02461 Mepo-Chr3 34638412 34639254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02461 23 228 AP2-EREBP Transcription Factor Family AT5G13910 45.673 7.62e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo3g02461 AP2 1.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02461 K09286 - gmx:100815668 182.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02461 3 34638412 34639254 Mepo3g02461 3 34638412 34639254 ECH