Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02453 ATGGGTTATCATTTCCTTCATCTTCTTCTATGTCTTCTCTTCTTCACTACCCATCACGCAAATGCCTTCAATCCTTCAATTCCCAACGACGCATTGTCTCTTCTCACCTTCAAACGCTTCGTCACTTCCGACCCTTCAAATCTTCTCTCCTGTTGGACCCACCGTTCATCTTTCAAATTCTGCAACTGGCACGGCGTCACTTGCGGCGGTGGAGACGGTAGAGTGACTGAACTTAATGTTACCGGTCTTCGTGGCGGTAAATTGGTGTCTGACATTGGAGATTTGTCTGAGCTAAGAGTTTTGTCTCTTCCCGGAAACATGTTCTCCGGCGAGATTCCGGCGAGTTTGGTGAATCTCCGGGGGCTTGAGGTTCTTGAGCTTCAAGGAAACAACTTTTCAGGGAAAGTGCCTTTTCAGATGAGTTATTTTGAATCAGTTTTTCTTGTTAATCTCTCTGGTAATGCTTTTTCTGGTGAAATTCCAAATGGGTTGGTTTTTTCTAGGAATGTGGAAATTGTTGATTTGTCTAATAATCAATTTTCTGGTTCTATTCCTTTGAATGGTTCTGGTAGTTGTGATTCTTTGAAGCATTTGAAACTTTCACATAATTTTTTGACTGGTGAGATTCCACACCAAATTGGGAAATGTAGAAACTTGAGGACCCTTTTGGTGGATGGGAATATTTTGGATGGTGAAATCCCTCATGAGATTGGGAATGTTGTTGAACTTAGAGTTCTTGATGTTTCTAGAAATAGTCTCACTGGAAGGATCCCTAATGAGCTAGGTTATTGTTTGAAATTGTCTGTGCTTGTGCTTACTGATTTGTATGAGGATCACGGCGGTTCGAATGATGGAAGTTTGTTGGAGGATAGCAGATTTAGAGGTGAATTTAATGCTTTTGTTGGGAATATTCCTTATAAAGTGTTGCTGCTTTCGAGTTTGCGGGTTTTGTGGGCGCCTCGAGCGAATCTCGGTGGACGGTTGCCTGCTGCTGGATGGTCAGATTCATGTTCTCTTAAAGTACTCAATTTGGCACAAAATTATGTTACTGGTGTTATGCCTGAGAGTTTGGGGATGTGTAGGAATCTAACTTTCTTGGACTTGAGCTCTAACAATTTAGTGGGACATCTGCCTTTGCAACATCTTCGGGTTCCTTGTATGACGTATTTCAATGTAAGCAGGAATAATATGTCTGGCATGCTTCCGGGGTTTACAAAAGAAAGGTGTCGATCGAGTAGCACCCTTGCTGCACTTGAACCTGCATTCCTAGAATTGGAAGGTTTGTATGATGCATACTTTAACATTCGTAGTTTGAGATTTCAAGAGAATGCTTTCATTGGTTCAGGTTTTGAAGAGACTGTTGTCGTTAGCCATGACTTCAGCTCGAACAGTTTTATGGGGCCTTTACCATTGTTCTTTGTTGGAGATAATCTTTTTACTGAAAATGAAAATCGTAACATATCATACATGTTGTCTCTCAATAATAATAAATTCAATGGAACGCTTCCATACCGACTAGTTTCAAACTGTAATGACCTCAAGACATTGTCAGTTAACCTGAGCATGAACCAACTATACGGGGAGATTTCCCAAGCGTTGTTTCTGAACTGTCCGCATTTGATGGATTTTGAAGCGGCATACAATCAAATTGGTGGATCAATTGAACCTGGTATTGGTGAGTTGGCATTTCTTCGGCGTCTTGATTTGACTGGAAACAAATTATCAGGAGAACTGCCTAATCAGTTGGGAAACTTAAAAAACATGAAATGGATGCTTCTAGGAGGAAACAATCTTACAGGCAAAATTCCTTACCAACTTGGTAGATTGACTTCCCTTGTTGTTTTGAATGTATCTCACAATTCGCTAATCGGAACAATTCCACCAAGTTTGTCAAATGCTGCAAGTCTTGAAATTATGTTGCTAGATCACAACAATCTTTCTGGGGAAATACCTCTATCGGTTTCTGCTCTTTCCAATCTTGTTCGACTAGATGTTTCATTCAACAATCTTTCCGGTCATATTCCTCCTCTTCAACACCCGAGTGATTGTGATTCATATAAAGGGAATCAACACCTGCACTCTTGCCCTGATCCATACTTTGACTCGCCTGCCTCTCTCCCAGCTCCTCTTGCAGTCAAGAATTCACGTAGTCGTCGTAGATGGAGGAAAGTAAGGACTGTGGTTATTACAGTGTCCGCTTCTGCTTTGGTGGGTCTATGCGCACTTTTGGGAATAGTGTTGGTGATTTGTTGTAGAAAGAGTAAACTTACTCGGCTTAGCAGCATTAGAAGGCGAGAAGTGGTGACCTTTCAAGTTGTTCCGATAGAATTGAGTTACGATAGTGTGGTCACAACTACCGGAAATTTCAGCATCCGGTATCTAATTGGCACAGGTGGCTTTGGATCAACTTACAAAGCAGAGCTATCACCGGGTTTTCTTGTTGCCATAAAGAGGCTTTCGATTGGCAGATTTCAAGGCATGCAACAGTTTGAAACCGAAATAAGGACGCTCGGGAGAATTCGACATAAGAATCTCGTGACTCTAATTGGCTATTACGTAGGAAAAGCTGAAATGCTGTTAATTTACAATTACCTCTCTGGTGGAAACCTTGAAGCTTTCATACATGATAGATCAGGGAAAAATGTGCAGTGGCCGGTTATTTACAAAATAGCAAAAGACATTGCCGAGGCCCTTGCTTACCTTCATTACTCATGTGTTCCTCGCATAGTTCACCGAGATATCAAGCCCAGCAACATTTTACTCGACGAAGATCTTAATGCGTACCTGTCTGATTTTGGCTTGGCACGGCTGCTGGAGGTATCCGAGACTCATGCCACCACTGATGTGGCGGGCACATTTGGTTATGTTGCGCCTGAGTACGCCACCACTTGTAGGGTTTCTGATAAAGCCGATGTTTACAGTTACGGTGTAGTGCTGTTAGAATTGATATCAGGAAGAAGGTCACTTGATCCGTCGTTTTCTGATTATGGAAATGGATTCAATATAGTACCGTGGGCGGAGCTTCTAATGACCGAAGGTCGTTGTTCAGAGCTGTTTTCATCGGCTTTGTGGGAAGTAGGGCCCAAGGAGAAGTTGCTAGGGCTTTTAAAGATTGCATTAACTTGCACAGAAGAGACTCTTTCTATTCGACCGTCGATGAAGCATGTTCTCGACAAATTGAAACAGTTGAAAAGTTGA 3198 0.4209 MGYHFLHLLLCLLFFTTHHANAFNPSIPNDALSLLTFKRFVTSDPSNLLSCWTHRSSFKFCNWHGVTCGGGDGRVTELNVTGLRGGKLVSDIGDLSELRVLSLPGNMFSGEIPASLVNLRGLEVLELQGNNFSGKVPFQMSYFESVFLVNLSGNAFSGEIPNGLVFSRNVEIVDLSNNQFSGSIPLNGSGSCDSLKHLKLSHNFLTGEIPHQIGKCRNLRTLLVDGNILDGEIPHEIGNVVELRVLDVSRNSLTGRIPNELGYCLKLSVLVLTDLYEDHGGSNDGSLLEDSRFRGEFNAFVGNIPYKVLLLSSLRVLWAPRANLGGRLPAAGWSDSCSLKVLNLAQNYVTGVMPESLGMCRNLTFLDLSSNNLVGHLPLQHLRVPCMTYFNVSRNNMSGMLPGFTKERCRSSSTLAALEPAFLELEGLYDAYFNIRSLRFQENAFIGSGFEETVVVSHDFSSNSFMGPLPLFFVGDNLFTENENRNISYMLSLNNNKFNGTLPYRLVSNCNDLKTLSVNLSMNQLYGEISQALFLNCPHLMDFEAAYNQIGGSIEPGIGELAFLRRLDLTGNKLSGELPNQLGNLKNMKWMLLGGNNLTGKIPYQLGRLTSLVVLNVSHNSLIGTIPPSLSNAASLEIMLLDHNNLSGEIPLSVSALSNLVRLDVSFNNLSGHIPPLQHPSDCDSYKGNQHLHSCPDPYFDSPASLPAPLAVKNSRSRRRWRKVRTVVITVSASALVGLCALLGIVLVICCRKSKLTRLSSIRRREVVTFQVVPIELSYDSVVTTTGNFSIRYLIGTGGFGSTYKAELSPGFLVAIKRLSIGRFQGMQQFETEIRTLGRIRHKNLVTLIGYYVGKAEMLLIYNYLSGGNLEAFIHDRSGKNVQWPVIYKIAKDIAEALAYLHYSCVPRIVHRDIKPSNILLDEDLNAYLSDFGLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSYGVVLLELISGRRSLDPSFSDYGNGFNIVPWAELLMTEGRCSELFSSALWEVGPKEKLLGLLKIALTCTEETLSIRPSMKHVLDKLKQLKS 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02453 1065 Pfam Leucine Rich Repeat 564 585 IPR001611 GO:0005515
Mepo3g02453 1065 Pfam Leucine Rich Repeat 194 216 IPR001611 GO:0005515
Mepo3g02453 1065 Pfam Leucine Rich Repeat 243 262 IPR001611 GO:0005515
Mepo3g02453 1065 Pfam Leucine Rich Repeat 611 632 IPR001611 GO:0005515
Mepo3g02453 1065 Gene3D Transferase(Phosphotransferase) domain 1 865 1064 - -
Mepo3g02453 1065 ProSiteProfiles Leucine-rich repeat profile. 362 383 IPR001611 GO:0005515
Mepo3g02453 1065 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 753 864 - -
Mepo3g02453 1065 FunFam Leucine-rich repeat receptor-like protein kinase 27 186 - -
Mepo3g02453 1065 Gene3D Phosphorylase Kinase; domain 1 750 864 - -
Mepo3g02453 1065 SUPERFAMILY Protein kinase-like (PK-like) 767 1060 IPR011009 -
Mepo3g02453 1065 ProSitePatterns Protein kinases ATP-binding region signature. 795 817 IPR017441 GO:0005524
Mepo3g02453 1065 Gene3D Ribonuclease Inhibitor 282 414 IPR032675 -
Mepo3g02453 1065 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Mepo3g02453 1065 CDD STKc_IRAK 795 1063 - -
Mepo3g02453 1065 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 430 702 - -
Mepo3g02453 1065 Gene3D Ribonuclease Inhibitor 86 276 IPR032675 -
Mepo3g02453 1065 Gene3D Ribonuclease Inhibitor 415 697 IPR032675 -
Mepo3g02453 1065 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 865 1065 - -
Mepo3g02453 1065 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 188 275 - -
Mepo3g02453 1065 SUPERFAMILY RNI-like 81 400 - -
Mepo3g02453 1065 ProSitePatterns Serine/Threonine protein kinases active-site signature. 909 921 IPR008271 GO:0004672|GO:0006468
Mepo3g02453 1065 Gene3D Ribonuclease Inhibitor 26 85 IPR032675 -
Mepo3g02453 1065 SUPERFAMILY RNI-like 310 677 - -
Mepo3g02453 1065 Pfam Protein kinase domain 794 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02453 1065 SMART serkin_6 789 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02453 1065 ProSiteProfiles Protein kinase domain profile. 789 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02453 1065 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 547 1054 - -
Mepo3g02453 1065 SMART LRR_typ_2 561 585 IPR003591 -
Mepo3g02453 1065 SMART LRR_typ_2 609 633 IPR003591 -
Mepo3g02453 1065 SMART LRR_typ_2 240 264 IPR003591 -
Mepo3g02453 1065 SMART LRR_typ_2 657 679 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02453 Mepo-Chr3 34528560 34533546 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02453 10 1064 Receptor kinase-like Gene Family AT3G02130 42.895 0.0 795
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Mepo3g02453 Pkinase 1.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02453 - - cam:101512699 1734.92