Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02445 ATGGTGGCGCAATCGTTGGAGATTCGTGATTCTGTTGTGAATGATTGTGTTATTCCGAAGCTTTTGAAGGTTTCAATGACTCCTAAGGTGAAGATTAAGGTGAAATACGGTGGAAAGAAGCTGAGCGATGAATCGAAGGATGTGTCAACGACGCCAATGTCGTCGCAGCGAAGATCGAGTTCGAGGATTCAAGCTAAGCAGAAAGAGGTTGAAGAGATTCAGCTTCGCCGGAAAGCTGAGGGGTTAGAAGCTGAAGAGAAATCCGACGAGGTTGAGGTTTCACCGGTGAAGTCGAGGAAGCGTGTGAGGAGAAGTCCTAGTCGGGAGACCGTGGTTAAGGAGGTTGTTGGGGAGAAAGAGACAACGGAGAAGAAGAAGGAAGAGGTTGGTGTTGAGGGGAAACCGACGAAGAAGAAGAAATCTGCGTCGGATGAGAAACGTGAGCTGATGGAGGTTTGGAATGAGAAAATGGCAGCGGAAACTGAAAATGCTGGTGGTGCATTGAGTGATAAGAACTCAACGGCAAAGGTGAAAGAGACTATTAGGACTTTTAACAAACACTATCTTCATCTGGTTCAGGAGGAGGAGGCGAGGGTTGCTAAAGATAAAGCTGAAATTGAGAAGAGAGGTGGCGGGAAGAAATCTGCTGGTAAAAAGAAATCTCCTAAAAAAATTCCAGAGAAGAAATCTCCTGGGAAGAAGTCCCTTAAGAAAGATGCAGAACCTAAAGAAAAACAGCACTCTGCCAAGCGACCTGATCTGAAAGCCATAACCAAGATGATGCAAAATAAGGAGATACTGTACCCTGACAAAAGAATTGGCGGCATTCCAGGAATTGAGGTTGGATATCAGTTCTATTCTCGTGCTGAAATGGTTGCCGTTGGTTTTCATAGCCACTGGTTAAATGGCATTGATTTTATCGGCCAATCTTATTCCAAAACGTACCCCAAGCTCAAACTCCCAGTTGCTGTGGCAATTGTCATTTCAGGCATGTATGAAGATGATCTGGATAATGCTGAGGATGTTGTGTACACTGGTCAAGGTGGGCATAATCTGACCGGTAATAAGCGTCAAATTCAAGATCAAAAGTTGGAGCGGGGTAATTTAGCACTCAAGAACTGCTGGGATCAAAAGGTGCCAGTAAGGGTGATTCGAGGTCATGACTCACGTAGCAGTTACACTCGTAAAGTCTACACATATGATGGCTTGTACAAGGTTGACAGCTATTGGGCAGAGAAGGGAATATCTGGCTTCACAGTATACAAGTTTCGTCTAAGGAGGGTTGAAGGACAGCCTACATTAACAACAAATCAGGTTTATTTCACAATGGGACGTGTACCTCAGTCTACAGCAGAAATACGAGGGTTGATATGTGATGATATCACCAACGGTCAGGAAGCTGTGCCCATTCCAGCTACAAATTTGGTTGATGACCCACCTGTTCCACCGCCCCCAGGTTTCACATATTTGAAGTCTCTGAAGGTTGCAAAAGGTGTTAAGCTTCCTGCGAGCGCCTCTGGATGCAAATGCAAAGACAAATGTATTGATCCAAACACCTGTGAATGTGCAAAGCGCAATGGCTTTGAATTTCCCTATGTATCTAAAGATGGTGGCAGATTAATTGAAGCTAAAGACGTTGTGTTTGAATGTGGTCCCAATTGTGGCTGTGGTCCTGAGTGTGTGAATAGGACTTCTCAAAGAGGACTACAATATCGTCTGGAGGTTTTCCGTACTGCAAAGAAAGGATGGGCTGTTAGATCCTGGGATTTTATACCTTCTGGTGCACCAGTTTGTGAGTACACAGGAATACTTGGTAGGACTGAAGACGTGGACAGTGTATTGGAAAACAACTATATTTTTGAGATAGATTGCTTGCAAACAATCAAGGGGCTTGGTCAAAGGGAGAGGCGGTCAAAAAATGTAGCATATGCTTCAAGTTTGCTGGAAAAATACGATGACCAAGATTCTGAAAGTGCACCAGAGTTTTGCATTGATGCCGGGTCTACTGGAAATGTTGCTAGGTTTATAAACCATTGTTGTGAGCCTAACTTGTTTGTACAATGTGTTTTGAGCACACACCATGATTTGCGATTGGCTCGGGTGGTGCTGTTTGCCGCTGACAACATACCCCCTTTACAGGAGCTGACATATGACTATGGCTATGCACTTGATAGTGTCTTGGACTCTGATGGGAAGGTAAAGCAAATGGCGTGCTATTGTGGAGCTACAGGCTGCAGGAAGCGATTATTCTAA 2253 0.4452 MVAQSLEIRDSVVNDCVIPKLLKVSMTPKVKIKVKYGGKKLSDESKDVSTTPMSSQRRSSSRIQAKQKEVEEIQLRRKAEGLEAEEKSDEVEVSPVKSRKRVRRSPSRETVVKEVVGEKETTEKKKEEVGVEGKPTKKKKSASDEKRELMEVWNEKMAAETENAGGALSDKNSTAKVKETIRTFNKHYLHLVQEEEARVAKDKAEIEKRGGGKKSAGKKKSPKKIPEKKSPGKKSLKKDAEPKEKQHSAKRPDLKAITKMMQNKEILYPDKRIGGIPGIEVGYQFYSRAEMVAVGFHSHWLNGIDFIGQSYSKTYPKLKLPVAVAIVISGMYEDDLDNAEDVVYTGQGGHNLTGNKRQIQDQKLERGNLALKNCWDQKVPVRVIRGHDSRSSYTRKVYTYDGLYKVDSYWAEKGISGFTVYKFRLRRVEGQPTLTTNQVYFTMGRVPQSTAEIRGLICDDITNGQEAVPIPATNLVDDPPVPPPPGFTYLKSLKVAKGVKLPASASGCKCKDKCIDPNTCECAKRNGFEFPYVSKDGGRLIEAKDVVFECGPNCGCGPECVNRTSQRGLQYRLEVFRTAKKGWAVRSWDFIPSGAPVCEYTGILGRTEDVDSVLENNYIFEIDCLQTIKGLGQRERRSKNVAYASSLLEKYDDQDSESAPEFCIDAGSTGNVARFINHCCEPNLFVQCVLSTHHDLRLARVVLFAADNIPPLQELTYDYGYALDSVLDSDGKVKQMACYCGATGCRKRLF 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02445 750 MobiDBLite consensus disorder prediction 198 212 - -
Mepo3g02445 750 SMART set_7 571 726 IPR001214 GO:0005515
Mepo3g02445 750 SMART preset_2 458 555 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo3g02445 750 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 60 742 - -
Mepo3g02445 750 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 91 750 IPR025794 GO:0016571
Mepo3g02445 750 MobiDBLite consensus disorder prediction 34 149 - -
Mepo3g02445 750 Pfam SET domain 582 720 IPR001214 GO:0005515
Mepo3g02445 750 SUPERFAMILY SET domain 454 726 IPR046341 -
Mepo3g02445 750 Pfam Pre-SET motif 461 563 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo3g02445 750 MobiDBLite consensus disorder prediction 62 149 - -
Mepo3g02445 750 ProSiteProfiles Pre-SET domain profile. 506 568 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo3g02445 750 Pfam SAD/SRA domain 273 431 IPR003105 -
Mepo3g02445 750 Coils Coil 65 85 - -
Mepo3g02445 750 Gene3D - 256 445 IPR036987 -
Mepo3g02445 750 SUPERFAMILY PUA domain-like 256 447 IPR015947 -
Mepo3g02445 750 Gene3D SET domain 451 750 IPR046341 -
Mepo3g02445 750 MobiDBLite consensus disorder prediction 228 253 - -
Mepo3g02445 750 SMART G9a_1 269 431 IPR003105 -
Mepo3g02445 750 MobiDBLite consensus disorder prediction 213 227 - -
Mepo3g02445 750 ProSiteProfiles YDG domain profile. 274 427 IPR003105 -
Mepo3g02445 750 ProSiteProfiles SET domain profile. 571 720 IPR001214 GO:0005515
Mepo3g02445 750 MobiDBLite consensus disorder prediction 47 61 - -
Mepo3g02445 750 ProSiteProfiles Post-SET domain profile. 734 750 IPR003616 -
Mepo3g02445 750 MobiDBLite consensus disorder prediction 198 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02445 Mepo-Chr3 34459673 34467833 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02445 260 750 EF-hand Containing Proteins AT5G13960 67.210 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mepo3g02445 SAD_SRA 1.4e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02445 K11420 - mtr:25496588 1061.6