Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02442 ATGTCCATCTTGCCCTCACAAACCCAATCGTCATCTTCATCTTCTCAAAATTCCTCAATCCCTAACCCTAATTTACAACATGGAATTTCAGATTCTCTTTCCCCTTTACTCAACCACTCTCTCGGATCTCTCCAGATCCACGATCTTCCAGGTCCATCAACTCCTGCTGCAGAAAATTCTGGTGGGCCCTCCGAAAAGGTGACGGAATTAGACTCTTCAAGTGGTATGAAGACACCTCAGCGAAACTCTAGAACACAATCTAGGAGTTACTCAGGAAGACGAACAGTTGGATCTTCCCAATATGAAGGGAAGGCAACAGGAACAGTTCCTTCTCATAGAAACCAACAGACTACCGGGTCTGTATATTCTCAAGGAAGCACCCCATTGGTAGGAAGGAAGTCTCAAATGGCGAATGCCAATCACTTGCTAAATTTTCAGTATGATCCAATATCCCGTTCTCAACAAAGGGGTCCTCCTCCTCCCCCTCCAGCAAGGAGGCAGAGAAAGACAAGACCATACAACAAAGATTTGTTTTTGCAGGCAAATTTCAAATTCATGGTGCTAGATTCTGGAAATTATTCACCGGACTCAATGGATCCAGATAAAATGTTGCAGTGGGAAGATATTATATGCGTGACATATTCGACCCCCTTTCCAGTTCAGTGTCCAATTTGTTTGGAGCATCCCCTGTGTCCCCAAATAACCTCATGTGGACACATTTTCTGTTTCCCATGTATACTACAATACTTGATGTTGGGTGAAGAGGATCACAAAGGTGATCGCTGGAAAAGGTGTCCGTTGTGCTTTGTGACGATATCTGTCAAGGATTTATATACACTCCACATAACAAATGTCAAACAGTATCAAGTAGGAGATAATATTGAGTTCACTTTCTTAACGAGGAAGAAGGATTCATTTACTCTTTCACATAAAAATAAACAAGAGGGTGATAATTCATCATGTGGCCGAGGCGATGTATGTGACCCCTTTTCCAAGTTCACACTCACCTCAGATGTAGATCTCTCAGTGAGACATGCAATATCAGATCTAGACGGTTGGCTGGCCAGAGCTGATTCAGGTCTTGTTGACGACCTGGAGAAGCTTCCATATGTTAGTGCTGCAATGCAGCAGTTAAAGCAGAGAAAGAAGTATTGGAATGAGCACAAGGCTTGTTATAGTGAAAAATCTTCTAACCTCATTGATCATGCACCCCAGACACCAACAATATCTACAAATGCTTGGGATAGTGACGACGAAAGCTGTTCTAATGGATCAAGAACTTCCTCTACCGATTTCCCCGATCAAAGTAAGGTTGTAATATTGGATAAATCAACTGCTGGAACCTGTCAGGATGTAACTTTGGATGTGGACAAGGTACTAGCTGAGAAGGAGATAAATCTGTCTTCTTCGTACGAGGAGAAAAATTGTATTCAAGGGCATTCTAATATTGGAGATGCAAAGGAAAATGATTCGTACAATTTCTATCAGGCCGCGGATGGTCAACATCTAATTCTTCATCCTTTGAACACAAAGTGTTTACTGCATCATTATGGTAGCTATGATAAGCTTCCTCACAGAATAAGTGGAAAGATTCTACAATTGGAGACAGTTACTCAATCTGAGGCTATGAGGAGGCGGTATCGATTTTTAAGTCATTTTCCGCTAACCACAATATTTCAGCTTTGTGAAGTTGATTTGAGTGAGATGTTGCCTCCTGAAGCACTGGCCCCTTTTATGGATGAAATAAAGAAACGTGCAAACCAGAGGAAGCAACTTGCAAAGAAGGAACAAAAGGAAAAATTGAAGGCCGAAGCTACTGATAATTATGCTCTTTCCATGTCAACCCATTATCAGTTTATTTCTCGTGATGATCCTCCCACGTTCTCCATGGAAGACTTTGAAGCTCTGGGAAATTCAGCTTTGTCATCAAGTCCTCCGGTTGTTGGTGAGAGGAAATTGTTCTCAAGTGTTACTAGGCTTGGTTTCGCCGCTGGCCATGATTCTCCATCCTTTCCTACTCAAGAAACTAGCGATCTACATAGTAACAATTCAATTGCTGGTTCTTCTGGTACAGCAGGTTTGAGGAATGGGGAGACACTATCATACTCCAATGTCATATCTAGAGCAGAATCTAATGGAACTTCGAATGCTCCGAAGACAAATGACTTAGGAAAGAAGGGAAAGAAACCAAATCGAGTTCTTCTGTCAACATCTGGTGGCAGGCGTTATTGA 2232 0.4207 MSILPSQTQSSSSSSQNSSIPNPNLQHGISDSLSPLLNHSLGSLQIHDLPGPSTPAAENSGGPSEKVTELDSSSGMKTPQRNSRTQSRSYSGRRTVGSSQYEGKATGTVPSHRNQQTTGSVYSQGSTPLVGRKSQMANANHLLNFQYDPISRSQQRGPPPPPPARRQRKTRPYNKDLFLQANFKFMVLDSGNYSPDSMDPDKMLQWEDIICVTYSTPFPVQCPICLEHPLCPQITSCGHIFCFPCILQYLMLGEEDHKGDRWKRCPLCFVTISVKDLYTLHITNVKQYQVGDNIEFTFLTRKKDSFTLSHKNKQEGDNSSCGRGDVCDPFSKFTLTSDVDLSVRHAISDLDGWLARADSGLVDDLEKLPYVSAAMQQLKQRKKYWNEHKACYSEKSSNLIDHAPQTPTISTNAWDSDDESCSNGSRTSSTDFPDQSKVVILDKSTAGTCQDVTLDVDKVLAEKEINLSSSYEEKNCIQGHSNIGDAKENDSYNFYQAADGQHLILHPLNTKCLLHHYGSYDKLPHRISGKILQLETVTQSEAMRRRYRFLSHFPLTTIFQLCEVDLSEMLPPEALAPFMDEIKKRANQRKQLAKKEQKEKLKAEATDNYALSMSTHYQFISRDDPPTFSMEDFEALGNSALSSSPPVVGERKLFSSVTRLGFAAGHDSPSFPTQETSDLHSNNSIAGSSGTAGLRNGETLSYSNVISRAESNGTSNAPKTNDLGKKGKKPNRVLLSTSGGRRY 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02442 743 MobiDBLite consensus disorder prediction 665 743 - -
Mepo3g02442 743 CDD RING-HC_RNF10 220 277 - -
Mepo3g02442 743 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 214 301 IPR013083 -
Mepo3g02442 743 MobiDBLite consensus disorder prediction 149 172 - -
Mepo3g02442 743 MobiDBLite consensus disorder prediction 1 128 - -
Mepo3g02442 743 MobiDBLite consensus disorder prediction 1 41 - -
Mepo3g02442 743 ProSitePatterns Zinc finger RING-type signature. 237 246 IPR017907 -
Mepo3g02442 743 PANTHER RING FINGER 10 FAMILY MEMBER 63 743 IPR039739 -
Mepo3g02442 743 SMART ring_2 222 268 IPR001841 -
Mepo3g02442 743 MobiDBLite consensus disorder prediction 402 431 - -
Mepo3g02442 743 MobiDBLite consensus disorder prediction 669 721 - -
Mepo3g02442 743 SUPERFAMILY RING/U-box 221 275 - -
Mepo3g02442 743 ProSiteProfiles Zinc finger RING-type profile. 222 268 IPR001841 -
Mepo3g02442 743 MobiDBLite consensus disorder prediction 57 128 - -
Mepo3g02442 743 Pfam Zinc finger, C3HC4 type (RING finger) 222 268 IPR018957 GO:0046872
Mepo3g02442 743 Coils Coil 579 599 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02442 130 693 C3H Transcription Factor Family AT3G26730 56.454 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02442 K26979 - gmx:100798764 1084.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02442 3 34397586 34404037 Mepo3g02442 3 34397586 34404037 ECH