Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02419 ATGTCGTTTCCGTGTGACTATTGCGACACAAGAAGCGCGGTGCTATATTGCAAACCAGACTCCGCGAAACTCTGTTTAGTTTGCGACCAGCACGTGCACTCCGCAAACGCACTCGCACTCAAGCACGTGCGTTTCCAAATCTGTCAAAACTGCAAAAACGACGCCGCTTCAGTTCGTTGCTTCACCGAAAACCTAGTTCAATGTCACCGCTGCGATTGGAACTCTCACGGCGGCGACGACGACTCCACCTCTTCATCCTTCCACCACCACAACCGCCGCCGTATCGAAGGTCTCACCGGTTGTCCTTCCGTTCACGAGATTGTTGCCACTTTGGGACTTGATTTGAAGCCGAACGACGCGGTTTTCGTAGCGGAATTTGAAGGTCCGGTGGTTCCGGTTGTGAAGAATAGGGATGAGGTGTATGAACAGGTGGTGGAAGTTGCGAAGAGGAAGAGGAATTTGGAGGAAGATGAAAATGAGTTGAGATTCAATGATTGTTGTAATGATGTTGATGATTTGTTGTTGCTTCAGCAAACTCCGTTTACTTCTTTGCTTAATTTTTCGTCTGAATTTGATGTTGGTGCTAAGAGAAATAGTATTGATTATGGAAATGAATCTGGTCTTCTTCTTTGGGATCGTAATCCAACGTATCAACCTCCTCAGGTATGGGATTTTCAATTACAGAAATCAAGAGATATGACATATGATGGTGTAGAAAATGCTTCCTTATTGATTCCAAAATCATTGCAAGATGTGCACAATATGAATTGCTCAACTCTTGGTGATGATATTCTATCAAGAAATCATCAATCAGATCAGTCATCATCAAGCCATGTGAAGAAGAAAGTAGAAAGCAACAAGAAAACTAGAGATGGGTTGTCTTCTGAGTCCAAATTGATTGAATCCATAACATACAGTGGCGCCGACAGTGTACCAGTTATGGAACATCTTTTGAGTGGGAGTGAAAATGTTAGCAACATAAATGCCAGGATTAGCTTGGAAGAGCACACAAGGAATAGAGGGGATGCCATGTTACGGTACAAGGAGAAGAAGAAAACTCGAAGGTTTGACAAGCACATTCGCTATGAATCAAGGAAGGCTAGGGCTGATACGAGAAAGAGAGTGAGAGGGCGATTTGTTAAGGCAACTGATGATATTCAAGAAAGATGA 1170 0.4359 MSFPCDYCDTRSAVLYCKPDSAKLCLVCDQHVHSANALALKHVRFQICQNCKNDAASVRCFTENLVQCHRCDWNSHGGDDDSTSSSFHHHNRRRIEGLTGCPSVHEIVATLGLDLKPNDAVFVAEFEGPVVPVVKNRDEVYEQVVEVAKRKRNLEEDENELRFNDCCNDVDDLLLLQQTPFTSLLNFSSEFDVGAKRNSIDYGNESGLLLWDRNPTYQPPQVWDFQLQKSRDMTYDGVENASLLIPKSLQDVHNMNCSTLGDDILSRNHQSDQSSSSHVKKKVESNKKTRDGLSSESKLIESITYSGADSVPVMEHLLSGSENVSNINARISLEEHTRNRGDAMLRYKEKKKTRRFDKHIRYESRKARADTRKRVRGRFVKATDDIQER 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02419 389 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 384 - -
Mepo3g02419 389 MobiDBLite consensus disorder prediction 274 295 - -
Mepo3g02419 389 Coils Coil 137 157 - -
Mepo3g02419 389 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Mepo3g02419 389 MobiDBLite consensus disorder prediction 263 296 - -
Mepo3g02419 389 ProSiteProfiles CCT domain profile. 340 382 IPR010402 GO:0005515
Mepo3g02419 389 Pfam CCT motif 340 382 IPR010402 GO:0005515
Mepo3g02419 389 CDD Bbox1_BBX-like 4 47 - -
Mepo3g02419 389 SMART bboxneu5 4 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02419 Mepo-Chr3 34170555 34175243 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02419 5 384 C2C2-CO-like Transcription Factor Family AT2G33500 37.055 1.32e-65 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Mepo3g02419 CCT 2.2e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02419 - - aprc:113862926 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02419 3 34170555 34175243 Mepo3g02419 3 34170555 34175243 ECH