Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02418 ATGGGTCGTTGCCCATGTTTTGGGTCTAGAAAGAAGGGAAAAGGGAAGAACCTCAATGATCAGGACGATGAAAAGAACCTTAAATCTGTTGGGAGCACTGTTTCTGTTTCTGGAAGATCTTTAGAACGGAGATCAGAAGCTACTACAGCAGAGAATACCGACATTTCTAATAAGTCTCAAATATTTACCTTCAGAGAACTTGCGACGGCAACTAAAAATTTTAGGGATGAAATGTTTATTGGACAAGGTGGATTTGGAACTGTTTACAAAGGAAAGCTAGGTAGCACTGGTCAGGCTGTAGCTGTTAAAAGACTTGATACAACTGGTTTCCAAGGTGAGAAGGAATTTTTAGTGGAAGTTCTCATGCTCTCTCTTCTACACCATCCCAACCTTGTTAGTATGATTGGTTACTGCGCGGAAGGAGATCAACGACTTCTTGTCTATGAATACATGCCTTTGGGATCCTTAGAATCTCATCTCCACGATCTTTTGCCGGATAATGAACCGCTCAATTGGAATACGAGAATGAGGATAGCTGTAGGGGCCGCAAGAGGACTAAATTATCTTCACCATGAAGCGGAGCCGTCTGTTATATATAGAGATTTGAAATCATCCAACATATTATTGGATGAAGGATTCTATCCAAAGCTTTCTGATTTCGGCCTTGCAAAATTCGGTCCAACTGGAGATCAATCATATGTTGCTACTAGAGTCATGGGAACACATGGTTATTGTGCACCTGAGTATGCAACTACTGGAAAATTAACAATGAGATCTGACATCTATAGTTTTGGAGTTGTGTTATTGGAGCTAATTACTGGACGTAGAGCGTATGATGAAACTCGTGCCCATGACAAGCATCTTGTTGATTGGGCACGCCCATTGTTCAGAGACAAAAGGAGTTTTCTAAAATTGGTAGATCCACATTTGCAAGGTTACTACCCTATATCAGGTCTAAGGATGGCCCTTGAAATGGCACGCATGTGTCTTCGAGAAGATCCACGTCTCCGGCCCTCTGCAGGCGATATAGTACTCGCCCTAGATTACTTGTCATCCAAGAAATATGTTCCAAAAGCATCCGAAATAGTTAGCCCAGGAGAGGTGGAGCACGACGAATCCCCCAATGAAACAACGATGATTTTGGTTAAAGATTCACTAAGAGAGCAAGCTCTTGCAGAGGCCAAACAGTGGGGGGAGACATGGAGAGAAAAGAGAAAACAAAGTGGCCAAAATAGTCCTGAGGAAATAATAAGGAGGTAA 1260 0.423 MGRCPCFGSRKKGKGKNLNDQDDEKNLKSVGSTVSVSGRSLERRSEATTAENTDISNKSQIFTFRELATATKNFRDEMFIGQGGFGTVYKGKLGSTGQAVAVKRLDTTGFQGEKEFLVEVLMLSLLHHPNLVSMIGYCAEGDQRLLVYEYMPLGSLESHLHDLLPDNEPLNWNTRMRIAVGAARGLNYLHHEAEPSVIYRDLKSSNILLDEGFYPKLSDFGLAKFGPTGDQSYVATRVMGTHGYCAPEYATTGKLTMRSDIYSFGVVLLELITGRRAYDETRAHDKHLVDWARPLFRDKRSFLKLVDPHLQGYYPISGLRMALEMARMCLREDPRLRPSAGDIVLALDYLSSKKYVPKASEIVSPGEVEHDESPNETTMILVKDSLREQALAEAKQWGETWREKRKQSGQNSPEEIIRR 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02418 419 SMART serkin_6 74 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02418 419 FunFam Serine/threonine-protein kinase PBS1 151 364 - -
Mepo3g02418 419 PANTHER OS07G0668900 PROTEIN 35 358 - -
Mepo3g02418 419 Pfam Protein kinase domain 75 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02418 419 ProSitePatterns Protein kinases ATP-binding region signature. 80 103 IPR017441 GO:0005524
Mepo3g02418 419 FunFam probable serine/threonine-protein kinase RLCKVII 46 150 - -
Mepo3g02418 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Mepo3g02418 419 SUPERFAMILY Protein kinase-like (PK-like) 55 347 IPR011009 -
Mepo3g02418 419 CDD STKc_IRAK 80 344 - -
Mepo3g02418 419 ProSiteProfiles Protein kinase domain profile. 74 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02418 419 Gene3D Phosphorylase Kinase; domain 1 34 150 - -
Mepo3g02418 419 MobiDBLite consensus disorder prediction 13 27 - -
Mepo3g02418 419 MobiDBLite consensus disorder prediction 1 52 - -
Mepo3g02418 419 Gene3D Transferase(Phosphotransferase) domain 1 151 364 - -
Mepo3g02418 419 MobiDBLite consensus disorder prediction 28 43 - -
Mepo3g02418 419 MobiDBLite consensus disorder prediction 397 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02418 Mepo-Chr3 34162770 34166213 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02418 51 402 Glycoside Hydrolase AT3G07070 58.217 2.38e-143 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mepo3g02418 Pkinase 1.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02418 K13430 - gmx:100809298 568.926