Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02415 ATGGCTGTTGATGAGAAGTATAGTGAGCTAGTTTTGGAAGATGGTATGAAATTACCTGTTGGATTCAGGTTTGATCCAACTGATCATGAGCTTGTAGATTATTATCTGACGAGGAAAGTCTGTAACCAACCTCTTCCAAATCTCTTGTTAGAATTCGATGTATTTCAAACTGAACCATGGAGGCTGCCAAGAGATAATAGGACCTCTTCAAAGCACATGAGGTACTATTTCTTTGATCTCAGGAACCATAGGTTCGAAAATATGGATGCAAGACGAGCTGGAAATGGTGAATGGAGAATATATGAGAGGAATGAGGAGTTTGCTCTTTCAAACAATCAATTGATTGGGAGAAAGAACACATTTGTTTACTGGAGAGGGCAAGGAAATCAAGCTCTGATGACACAATGGAGGATGCATGAATTTGTCATCGGTACAATTTTTCATCAAACAAAGGTGTACTCAGCTGTAGGTGCCTATCGGATATTTAAGATGAAGGTAGCAAAAGCTGAGAAGAAGGCCCCCACACCAACTGTGATTGATTTCACAATGGAAGATGCAAGTGTCTCTGCCCCTCCTCCCTCTCCATGA 588 0.4099 MAVDEKYSELVLEDGMKLPVGFRFDPTDHELVDYYLTRKVCNQPLPNLLLEFDVFQTEPWRLPRDNRTSSKHMRYYFFDLRNHRFENMDARRAGNGEWRIYERNEEFALSNNQLIGRKNTFVYWRGQGNQALMTQWRMHEFVIGTIFHQTKVYSAVGAYRIFKMKVAKAEKKAPTPTVIDFTMEDASVSAPPPSP 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02415 195 Pfam No apical meristem (NAM) protein 19 142 IPR003441 GO:0003677|GO:0006355
Mepo3g02415 195 SUPERFAMILY NAC domain 14 147 IPR036093 GO:0003677|GO:0006355
Mepo3g02415 195 ProSiteProfiles NAC domain profile. 18 164 IPR003441 GO:0003677|GO:0006355
Mepo3g02415 195 Gene3D NAC domain 27 172 IPR036093 GO:0003677|GO:0006355
Mepo3g02415 195 PANTHER NAC TRANSCRIPTION FACTOR 56 16 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02415 Mepo-Chr3 34076825 34078273 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02415 9 141 NAC Transcription Factor Family AT5G13180 38.686 6.80e-25 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo3g02415 NAM 2.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02415 - - mtr:25498955 229.565