Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02391 ATGGCTCCTGAAACCAAAGAATCGTTAAACTCCACCCAATTATACCTCACCGCACTCCAATCCCTCAATCTTCCACCACCCACCCTCCCCCTCCCACCACTCCCAACCACCACCATCCCCCACTCCAAACTCATCCCTAACACCCGCTTCCTCATCGACTCCTTCCGCCACACCACCCCTTCCTCCTTCACCTACTTCCTCTCCCACTTCCACTCCGATCACTACTCCCCTCTCTCCTCCTCATGGTCCCACGGCATCATCTTCTGTTCCCCAATCACCTCCCACCTCCTCACCAACATCCTCCACATCCCATCCCCTTTCATTCACCCTCTTCCTCTCAACCAACCCGTCACCATCGACGGCACCGTTGTAACCCTAATTGACGCTAATCACTGCCCCGGCGCAGTTCAGTTTCTTTTTAAAGCGAATGCAGCATCCCTTACCCCTAGGTATGTTCATACTGGTGATTTTAGGTTTAATCATGAAATGTTGTTGGATTTGAATCTTGGTGAATTTATTGGTGCGGATGTTGTGTTTTTGGATACGACTTATTGTCATCCCAAATTTGTTTTTCCGACTCAAGATGAGTCGGTTGATTATATTGTTGATGTTGTAAAGGAATGTGATGGTGAGGATGTTTTGTTTCTTGTTGCTACTTATGTTGTTGGTAAGGAGAAGATTTTGCTTGAGATTGCGCGGAGGTTTGGGAAGAAAGTGTGTGTGGATGGTAAGAAGATGGAGGTTTTGAAGGCTCTTGGGTATGGGGAGAGTGGTGAGTTTACTGAGGATAGGTTGGAGAGTAATGTGCATGTTGTTGGGTGGAATGTGTTGGGGGAGACTTGGCCGTATTTTAGACCGAATTTTGTTAGGATGAAGGAGATTATGGTTGAGAGAGGATACTCGAAGGTTGTGGGTTTTGTTCCAACTGGATGGACTTATGAAGTGAAGCGTGATAAGTTTAAGGTTAGGGAGAAGGATTTGTGTAAGATTCATCTTGTGCCGTATAGTGAGCATTCAAATTATGAGGAGCTTAGGGAATATGTGAGGTTTTTGAAACCAAAGAAGGTTGTTCCGACTGTGGGGTTAGATGTTGAGAAGAGTGATAGTAAACATGTTGACAAAATGAGGAAGTATTTTTCTGGGTTGGTTGATGAGACGGCCAACAAGCAAGAGTTTTTAAAGGGTTTTAAGCGGTGTGACTCTGGTGCAGCAGGTTTTGAGGCCGGGAAGGATGTGAGCAATGATACGGAACCAGGGCAGAGCGCTGAGAAAGAAGTGAAGCCATCTGATTCTGGGGGGCATAAAAGTATTAATCAGGATGTTGCTGTGAGTCTATCATCTTGTATGGGAGAAACTTGCATAGAAGATCCTACATTGCTAAATGATGAGGAAAAAGAGAGAGTTGTTCAGGAATTAAGTTGTTGTTTGCCCACGTGGGTCACCCGAAGCCAGATGTTAGATCTGATCAGCATCTCTGGGAGCAATGTCGTTGAAGCTGTTTCTAATTTCTTTGAACGTGAAACTGAATTTCACGAGCAAGTAAATTCCGGTCAAACTTCAATTCCATCACCCAGGTCTTGCTCATCAATTGACACCAGTCCGCTTCCAAAATCAAACCTCAAGTCTTGCTCATCGAATGACGCCAATCCGTTTTCAAAATCAAACCTCAACATTACAAACAGCACATCAAAAAAATTGGACCTTTTTCGAAGTCAAGACTCTAAATTGACTAACCTAAGGAAAGCACTATCAAATCAGATTTCCCCTTCCAAAAGAAAGAAGGGTAGTGAAAGCAAGTCAAACAAGAAAGTAAAAGTCAAAGCAAAATCAGAACCAAGTGGTTCAAAGCAGGCAACAATAACAAAATTCTTTGGCAAAGCAATGCCTGTAATGCCTGGTGATACTCAATCTGATCAATTTGGATCGATGTCTGGTGAAAGCCCCGAAGTTGAAGAATTGGTGCCAACTGATGCTGGAAACTTATATAAGCAAGAGATTGATCAGTTTATGCAAATAATAAATGGGGACAAGTCATTGAGAAAGCAAGCAATTACTATAATTGAGGAGGCAAAAGGAGACATCAATAAGGCATTGGATATATATTACTCTAATTCTTGCAATCTCGGTGAAAGGGAAATATCAGTTCAAGGGGAATGCGAAGTTGACAGACCTTTAGAGAAGAAGCATGTGTCAAAAGAGTTGAAAGTTATACCTGATATTTCTATTCATAGAGTGTTAAAAGATAATGTAGATGCAACTCATGTATCACTACCATCTGATAAATACAACCCCAAAGAACATGCGTGTTGGAAAGATGGACAACCTGCACCATATTTACTTCTTGCACGAACCTTCAGCCTGCTTGAAGATGAGAAAGGAAAGATAAAAGCTACTTCTATACTATGCAACATGTTCAGAAGTTTGTTGGTCTTGTCTCCAGAAGACGTGCTTCCTGCTGTATATCTATGTACAAACAAAATTGCTGCAGATCATGAAAATGTGGAACTAAATATTGGTGGAAGTTTAGTCACTACAGCACTTGAAGAGGCATGCGGGACAAACCGATTGAAAATAAGGGAGATGTATAATAAACTTGGCGACCTTGGTGATGTTGCTCAAGAGTGTCGTCAAACACAGAGATTGCTCGCACCACCTACACCGCTTCTAATTAAGGATATTTACTCTGCACTACGAAAGATAAGTGTACAAACAGGCAATGGAAGCACATTACGAAAGAAAGGCATCATTGTTCATCTCATGCGTTCCTGCCGTGAAAAGGAGATGAAGTTTCTTGTTCGAACCTTGGTCAGGAACTTGAGGATTGGGGCAATGCTTAGAACTGTTTTGCCTGCATTGGCTCATGCTGTTGTTATGAATTCTCGCCCAACTGTGTGCCAAGAAGGAACAGCAGAAAATTTGAAGGCAGCGCTTCAGGTCCTTTCTGTGGCAGTTGTTGAAGCATATAACATACTGCCAAATTTGGATATCATAGTCCCAACTCTCATGAACAAAGGCATTGAGTTTTCAGTTTCAAGTTTATCAATGGTTCCAGGAATCCCAATCAAGCCTATGCTTGCAAAGATCACCAATGGCATTCCCCAAGCATTGAAGCTATTTCAAAATAAAGCATTTACATGTGAATATAAGTATGATGGTCAGCGAGCTCAAATTCACAAATTAGTTGATGGATCAGTTCATGTTTTTTCAAGAAATGGAGATGAATCAACTTCGAGATTCCCTGATCTTGTTGACATGATAAAGGAATCTTGCAAGCCTGTTGCATCAACTTTCATAATTGATGCCGAGGTTGTTGGCATTGATAGGAAAAATGGATGTAGGATTATGTCTTTCCAGGAGTTATCTTCACGTGGGAGAGGAGGCAAAGATACTTTAGTCACCAAAGAGAGCATAAAGGTGGGCATTTGCATCTTTGTCTTCGATATCATGTTTGCAAATGGAGAACAGTTACTGGGTTTCCCTCTCCGCCTAAGACGAAAGTATCTGAAGGATTTGTTCTATGATGAACGACCTGGGTATTTTGAATATGCAAAAGAAACATCTATCGAAGCAGATGATGCTTGCTTAACGTGTGAAGCCACATTAACTAGAATAAATGCTTTCCTTGAAGATGCACTACACTCTTCATGTGAAGGAATTATGGTGAAAACGTTGGATATTGATGCTGGGTATTCTCCATCGAAGCGTTCTGACAAATGGTTAAAGGTCAAGCGAGATTATGTGGAAGGATTAAATGATACTATTGATTTAGTACCAATTGGTGCTTGGCATGGAAATGGAAGGAAAGCTGGATGGTATAGTCCATTTCTCATGGCATGTTTCAATCCTGAAACCGAGGAGTATCAAAGTGTATGCCGTGTAATGTCTGGGTTCACAGACTCTTTTTACATAGAGATGAAAGAATTCTTTTCGGAGGATAAATTGTTGTCAAAAAAGCCACCATATTATCAAACAGGAGAGACACCAGACATGTGGTTTTGTCCACAACTTGTTTGGGAAATAAGAGGTGCAGACTTTACAGTATCCCCAGTTCACCATGCTGCCATTGGTTTGGTTCATCCTTCTCGAGGCATCTCTATCAGATTTCCAAGATTTATTTGCAGAGTGTCAGACAGAAACCCAGACGAATGTAGCACTGCTGCTGATATAGTTGAAATGTTTCATTCCCAGACTCGGAAAATGGATGTCCCAACTGAAGGTTGA 4221 0.4181 MAPETKESLNSTQLYLTALQSLNLPPPTLPLPPLPTTTIPHSKLIPNTRFLIDSFRHTTPSSFTYFLSHFHSDHYSPLSSSWSHGIIFCSPITSHLLTNILHIPSPFIHPLPLNQPVTIDGTVVTLIDANHCPGAVQFLFKANAASLTPRYVHTGDFRFNHEMLLDLNLGEFIGADVVFLDTTYCHPKFVFPTQDESVDYIVDVVKECDGEDVLFLVATYVVGKEKILLEIARRFGKKVCVDGKKMEVLKALGYGESGEFTEDRLESNVHVVGWNVLGETWPYFRPNFVRMKEIMVERGYSKVVGFVPTGWTYEVKRDKFKVREKDLCKIHLVPYSEHSNYEELREYVRFLKPKKVVPTVGLDVEKSDSKHVDKMRKYFSGLVDETANKQEFLKGFKRCDSGAAGFEAGKDVSNDTEPGQSAEKEVKPSDSGGHKSINQDVAVSLSSCMGETCIEDPTLLNDEEKERVVQELSCCLPTWVTRSQMLDLISISGSNVVEAVSNFFERETEFHEQVNSGQTSIPSPRSCSSIDTSPLPKSNLKSCSSNDANPFSKSNLNITNSTSKKLDLFRSQDSKLTNLRKALSNQISPSKRKKGSESKSNKKVKVKAKSEPSGSKQATITKFFGKAMPVMPGDTQSDQFGSMSGESPEVEELVPTDAGNLYKQEIDQFMQIINGDKSLRKQAITIIEEAKGDINKALDIYYSNSCNLGEREISVQGECEVDRPLEKKHVSKELKVIPDISIHRVLKDNVDATHVSLPSDKYNPKEHACWKDGQPAPYLLLARTFSLLEDEKGKIKATSILCNMFRSLLVLSPEDVLPAVYLCTNKIAADHENVELNIGGSLVTTALEEACGTNRLKIREMYNKLGDLGDVAQECRQTQRLLAPPTPLLIKDIYSALRKISVQTGNGSTLRKKGIIVHLMRSCREKEMKFLVRTLVRNLRIGAMLRTVLPALAHAVVMNSRPTVCQEGTAENLKAALQVLSVAVVEAYNILPNLDIIVPTLMNKGIEFSVSSLSMVPGIPIKPMLAKITNGIPQALKLFQNKAFTCEYKYDGQRAQIHKLVDGSVHVFSRNGDESTSRFPDLVDMIKESCKPVASTFIIDAEVVGIDRKNGCRIMSFQELSSRGRGGKDTLVTKESIKVGICIFVFDIMFANGEQLLGFPLRLRRKYLKDLFYDERPGYFEYAKETSIEADDACLTCEATLTRINAFLEDALHSSCEGIMVKTLDIDAGYSPSKRSDKWLKVKRDYVEGLNDTIDLVPIGAWHGNGRKAGWYSPFLMACFNPETEEYQSVCRVMSGFTDSFYIEMKEFFSEDKLLSKKPPYYQTGETPDMWFCPQLVWEIRGADFTVSPVHHAAIGLVHPSRGISIRFPRFICRVSDRNPDECSTAADIVEMFHSQTRKMDVPTEG 1406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02391 1406 Pfam ATP dependent DNA ligase C terminal region 1269 1373 IPR012309 GO:0003910|GO:0006281|GO:0006310
Mepo3g02391 1406 ProSitePatterns ATP-dependent DNA ligase AMP-binding site. 1047 1055 IPR016059 GO:0003909
Mepo3g02391 1406 NCBIfam ATP-dependent DNA ligase 835 1393 IPR000977 GO:0003910|GO:0005524|GO:0071897
Mepo3g02391 1406 Gene3D - 754 1025 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Mepo3g02391 1406 Gene3D - 1248 1404 IPR012340 -
Mepo3g02391 1406 MobiDBLite consensus disorder prediction 581 616 - -
Mepo3g02391 1406 Gene3D - 1034 1247 - -
Mepo3g02391 1406 MobiDBLite consensus disorder prediction 513 546 - -
Mepo3g02391 1406 MobiDBLite consensus disorder prediction 417 431 - -
Mepo3g02391 1406 Pfam DNA repair metallo-beta-lactamase 258 361 IPR011084 -
Mepo3g02391 1406 Gene3D - 45 360 IPR036866 -
Mepo3g02391 1406 SUPERFAMILY Metallo-hydrolase/oxidoreductase 65 361 IPR036866 -
Mepo3g02391 1406 SUPERFAMILY ATP-dependent DNA ligase DNA-binding domain 756 1006 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Mepo3g02391 1406 CDD Adenylation_DNA_ligase_I_Euk 1014 1246 - -
Mepo3g02391 1406 SUPERFAMILY Nucleic acid-binding proteins 1252 1396 IPR012340 -
Mepo3g02391 1406 FunFam DNA ligase 190 338 - -
Mepo3g02391 1406 FunFam DNA ligase 1248 1405 - -
Mepo3g02391 1406 Gene3D DNA ligase/mRNA capping enzyme 1052 1183 - -
Mepo3g02391 1406 FunFam DNA ligase 1052 1183 - -
Mepo3g02391 1406 CDD SNM1A-1C-like_MBL-fold 39 187 - -
Mepo3g02391 1406 ProSiteProfiles ATP-dependent DNA ligase family profile. 1134 1281 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Mepo3g02391 1406 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 979 1245 - -
Mepo3g02391 1406 MobiDBLite consensus disorder prediction 407 436 - -
Mepo3g02391 1406 Pfam ATP dependent DNA ligase domain 1023 1243 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Mepo3g02391 1406 Pfam DNA ligase N terminus 778 953 IPR012308 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Mepo3g02391 1406 CDD OBF_DNA_ligase_I 1252 1395 - -
Mepo3g02391 1406 Gene3D - 190 338 - -
Mepo3g02391 1406 PANTHER DNA LIGASE 1/3 FAMILY MEMBER 271 1398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02391 Mepo-Chr3 33784190 33799693 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02391 758 1396 Core DNA Replication Machinery Family AT1G08130 39.441 8.97e-166 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02391 - - gmx:100807673 2132.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02391 3 33784190 33799693 Mepo3g02391 3 33784190 33799693 ECH