Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02365 ATGGCAGATGTTGATTACCATGAAAACTCCATTTCTACCCCTACCTCCACCAATAGCCTAAAGCTCTTTGGCATCAACATTCAAGAAGCTTGTTTGAACCAATCTCCAACACAATCAGAATCATCTGAGCATTTGAATGGGAGAAAACTATACGAGTGCCAATATTGTTGTAGAGAATTTGCAAATTCACAAGCCTTAGGAGGACACCAAAATGCACACAAGAAAGAAAGAAAACTTTTGAAACGTGCTCAAATGCAAGCAGCTCGTGCCTTTGTTCCTTCACATTTCCATAACAGATTCATGCCATCACCACAGTGGCTGCCACAACAAAGTCATTTCCTCGCCAATGGTCCACCATCTCAGACACCTTCGTCGGCATGGCTATGCACCACGCATGCAGCAGGTTCGGGAGCTATTTTAGCTCCCGCAGCTGCGTTTGATGGCAGTGTTCATCGCCATAGTTCTAAATTTGGTGGATTCAACAATGGTGATTGTAGTGAACAAGGATTTGGTTTAAATTTGCATCTTGGACTATAA 537 0.4302 MADVDYHENSISTPTSTNSLKLFGINIQEACLNQSPTQSESSEHLNGRKLYECQYCCREFANSQALGGHQNAHKKERKLLKRAQMQAARAFVPSHFHNRFMPSPQWLPQQSHFLANGPPSQTPSSAWLCTTHAAGSGAILAPAAAFDGSVHRHSSKFGGFNNGDCSEQGFGLNLHLGL 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02365 178 ProSiteProfiles Zinc finger C2H2 type domain profile. 51 78 IPR013087 -
Mepo3g02365 178 ProSitePatterns Zinc finger C2H2 type domain signature. 53 73 IPR013087 -
Mepo3g02365 178 SUPERFAMILY beta-beta-alpha zinc fingers 47 78 IPR036236 -
Mepo3g02365 178 PANTHER ZINC FINGER PROTEIN 5 8 178 IPR044299 GO:0010090
Mepo3g02365 178 Gene3D Classic Zinc Finger 30 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02365 Mepo-Chr3 33465960 33466626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02365 15 178 C2H2 Transcription Factor Family AT1G67030 41.206 5.71e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02365 - - tpra:123891304 269.626