Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02357 ATGGCTTCTACCACCAAAGACTCAGATTTAGAATATTTGGAACACATTCAACAATACCTTCTTTTTGATGATTCTAGCATGCTGAAATCTCATCAACCTTTTCCAAGCCCTAAAAGTGACAATGATTCAGACACAACTGTAGAGGCGCGTGAAGTAAGCACGCCTCCTGTATGGAAGCGGTACAAGGGAGTGAGGCGTAGGCCATGGGGGAAGTTCGCGGCAGAGATCAGAGATCCAAAAAAGAATGGTGCTAGAGTTTGGCTTGGAACTTATGTGACTGAGGAGGAAGCAGCTTTGGCTTACGACAAAGCTGCTTTTAAGATGCGAGGCCGAAAGGCCAAGCTTAATTTTCCCCACCTCATTGGCTCTGATGTGTCTACACCAGAGTCAGAGAGGGAGGTGGTTTTGAAACGGGAATCGCCCGAGCCTTCTTCTTCTTCATCGGAGGGAAGTTGTGAATCATTGTCACCAGGGTCGAAGAGGAGGAGGGGCATGGTTGACCTACTTAACAAATTAGCCAAGAATAGAAGCCAAGTAGCCACGGTGGTTGGCGTTGAAAAGGCCTCACAAGCAAATGATTTTGAGCAGTGGGTGAATGAGTTGAATGATTGCACTCTAATCTAG 624 0.4663 MASTTKDSDLEYLEHIQQYLLFDDSSMLKSHQPFPSPKSDNDSDTTVEAREVSTPPVWKRYKGVRRRPWGKFAAEIRDPKKNGARVWLGTYVTEEEAALAYDKAAFKMRGRKAKLNFPHLIGSDVSTPESEREVVLKRESPEPSSSSSEGSCESLSPGSKRRRGMVDLLNKLAKNRSQVATVVGVEKASQANDFEQWVNELNDCTLI 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02357 207 CDD AP2 59 120 IPR001471 GO:0003700|GO:0006355
Mepo3g02357 207 MobiDBLite consensus disorder prediction 140 155 - -
Mepo3g02357 207 MobiDBLite consensus disorder prediction 29 54 - -
Mepo3g02357 207 MobiDBLite consensus disorder prediction 128 160 - -
Mepo3g02357 207 Gene3D AP2/ERF domain 59 119 IPR036955 GO:0003700|GO:0006355
Mepo3g02357 207 PANTHER DNA-BINDING DOMAIN 40 171 IPR044808 GO:0003700|GO:0009873
Mepo3g02357 207 PRINTS Ethylene responsive element binding protein signature 100 120 IPR001471 GO:0003700|GO:0006355
Mepo3g02357 207 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Mepo3g02357 207 FunFam Ethylene-responsive transcription factor 2 59 119 - -
Mepo3g02357 207 ProSiteProfiles AP2/ERF domain profile. 60 118 IPR001471 GO:0003700|GO:0006355
Mepo3g02357 207 SMART rav1_2 60 124 IPR001471 GO:0003700|GO:0006355
Mepo3g02357 207 SUPERFAMILY DNA-binding domain 60 119 IPR016177 GO:0003677
Mepo3g02357 207 Pfam AP2 domain 60 110 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02357 Mepo-Chr3 33359031 33359855 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02357 60 146 AP2-EREBP Transcription Factor Family AT2G44840 72.414 6.51e-38 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo3g02357 AP2 1.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02357 K09286 - gmx:102663872 250.366