Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02355 ATGGCTTCTACCACCAATGACTCAGATTTTGCATATTTGGAACATATTCAACAATACCTTCTTTTTGATGATTCCAGCTTTCTAACATCTTCTCAACCTTCTCCAAGCCCTAAAAGTGACAATGAGTCAGACACAACTATAGAGGCGCGTGAAATAAACACCGCTCCGATATGGAAGCGGTACAAGGGCGTGAGGCGTAGGCCATGGGGGAAGTTTGCGGCAGAGATCAGAGATCCAAAAAAGAATGGTGCTAGGGTTTGGCTTGGTACTTATGTGACTGAGGAGGAAGCAGCTTTGGCTTACGACAAAGCTGCTTTTAAGATGCGTGGCCGAAAGGCCAAGCTTAATTTTCCCCACCTCATTGGCTCTGATGTGTCTACACCAGAGCCAGAGAGGGAGGTGGTTTTGAAACGGGAATCACCAGAGCCTTCTTCATCGGAGGAAAGTTGTGAGTCATCGTCACCAAGGTTAAAGAGGAGGAGGGGCACGGTTGACCTACTTAACAAACTAGCCAAGAATAGATGTCAAGCTAAGGTGGTTGAAATTGAAACGGTCTCATCACAGGCAAATGATTTTGAGCAATGGGTGAATGAGTTGAGTGATAGCTCTCTAATTTGGTTCTCTTAG 627 0.4561 MASTTNDSDFAYLEHIQQYLLFDDSSFLTSSQPSPSPKSDNESDTTIEAREINTAPIWKRYKGVRRRPWGKFAAEIRDPKKNGARVWLGTYVTEEEAALAYDKAAFKMRGRKAKLNFPHLIGSDVSTPEPEREVVLKRESPEPSSSEESCESSSPRLKRRRGTVDLLNKLAKNRCQAKVVEIETVSSQANDFEQWVNELSDSSLIWFS 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02355 208 CDD AP2 59 120 IPR001471 GO:0003700|GO:0006355
Mepo3g02355 208 MobiDBLite consensus disorder prediction 27 42 - -
Mepo3g02355 208 Pfam AP2 domain 60 110 IPR001471 GO:0003700|GO:0006355
Mepo3g02355 208 PANTHER DNA-BINDING DOMAIN 40 173 IPR044808 GO:0003700|GO:0009873
Mepo3g02355 208 FunFam Ethylene-responsive transcription factor 2 59 119 - -
Mepo3g02355 208 MobiDBLite consensus disorder prediction 27 49 - -
Mepo3g02355 208 SMART rav1_2 60 124 IPR001471 GO:0003700|GO:0006355
Mepo3g02355 208 Gene3D AP2/ERF domain 59 119 IPR036955 GO:0003700|GO:0006355
Mepo3g02355 208 MobiDBLite consensus disorder prediction 130 145 - -
Mepo3g02355 208 PRINTS Ethylene responsive element binding protein signature 100 120 IPR001471 GO:0003700|GO:0006355
Mepo3g02355 208 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Mepo3g02355 208 ProSiteProfiles AP2/ERF domain profile. 60 118 IPR001471 GO:0003700|GO:0006355
Mepo3g02355 208 MobiDBLite consensus disorder prediction 124 158 - -
Mepo3g02355 208 SUPERFAMILY DNA-binding domain 60 119 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02355 Mepo-Chr3 33345545 33346309 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02355 60 148 AP2-EREBP Transcription Factor Family AT2G44840 71.910 1.24e-38 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo3g02355 AP2 1.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02355 K09286 - gmx:102663872 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04705 1 55010510 55011272 Mepo3g02355 3 33345545 33346309 PCT