Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02340 ATGGCACTATCCACATTCATTATGATTCTGTTCATAATTTTGTTCACTTCATGGCCACAAGCTGTAGCTCAAGACAGTGAAGCAAAATCAGCTCTATTAAAATGGAAAAATAGCTTTGACAACCAAAGCCAAGCTCTCTTGCCAACTTGGAAAAATACCACAAATCCATGCAGATGGCAAGGAATTCATTGTGACAAGTCCAATTCAATTACTACCATAAACCTTAAAAGTTTTGGACTAAAAGGTACACTTCACTCTCTCACATTTTCTTCATTCACAAACCTCACAACCCTAAATATCTATGATAACAACTTTTATGGAACCATTCCTCCACAAATTGGTAACATCTCAAAAATAAATTCATTGAATTTTTCTCTAAATCCTATTGATGGTTCCATCCCTCAAGAAATGTTCACATTAAAAAGTTTACAAAATATTGATTTTTTGTATTGTAAATTAAGTGGAGCAATTCCTAATTCCATAGGAAATTTAACCAACCTATTGTATCTAGATTTAGGAGGCAACAATTTTTTTGGCACTCCTATTCCTCCTGAGATTGGAAAATTGAACAAATTATGGTTTCTATCAATTCAAAAAACTAACCTTATTGGTTCTATTCCAAAAGAAATTGGGTTTTTGACAAACCTTACTTATATTGATTTGTCAAACAACCTTCTTTCTGGTGTTATTCCTGAAACCATGGGCAACATGAGTAAATTAAATTTACTTATCCTTGCTAATAACACAAAGGTTTCTGGTCCAATTCCACACTCCTTGTGGAACATGTCTAGCTTGAACATGATCTTACTTTATAACATGAGTCTTTCTGGTTCAATCCCTGAATCTGTAGAAAACTTGATTAATGTGAATGATCTTGCACTTGATAGCAATCGCCTTTCTGGAACCATTCCTTCCACAATTGGAAACTTGAAAAATCTCCAATATTTGAATTTGGGATTCAATCGTTTTTCTGGATCAATTCCTGACTCTATAGGAAATTTGACCAATTTGGCTGTCCTTAGTCTCCAAGCAAACAATCTCACTGGAACAATTCCAGCTACAATTGGAAATTTGAAGCAGCTCATTGTCCTTGAACTATCTACCAATAAACTTCATGGTAGAATTCCAAATGAACTCAATAACAATACCAATTGGTATTCCTTTCTTGTGTCTGAGAATGATTTTGTTGGCCATTTGCCGTCTCAAATATGTTCTGGTGGAAAATTAACATTCTTAAATGCTAATAATAACCGTTTCACTGGTCCAATACCAACAAGTTTGAAAAACTGTTCTAGCATCCAAAGGATCAGAATTCAGGCAAATCAAATAGAAGGTGATATAGCACAAGTTTTTGGTGTGTATCCAATTTTGCAATACTTTGAGGCGAGTGATAATAAATTTCATGGACAAATTTCACCAAACTGGGGAAAGTGTCTTAATATTGAGAATTTCAAGATATCCAACAATAATATTTCTGGTGCTATACCATTAGAACTTACTCGTTTGACCAAGCTAGGTAGGCTTCATCTTTCTTCAAATCAATTGACTGGGAAACTTCCAAAGGAATTAGGACGCATGGCATCATTAATGGAACTCAAGATTAGTAACAATCATTTCTCGGAAAACATCCCAACAGAAATTGGATCGCTACAATCACTTGGCGAGTTGGACCTCGGAGGAAACGAGTTGAGTGGCACGATACCGAAAGAAGTTGCGGAGCTACCGAGGTTACGAATGTTGAATTTGAGCAGAAACAAAATTGAAGGAAGTATTCCATCTTTGTTTGGTTCAGCTCTTGAGTCACTTGATCTTAGTGGCAATCTTTTTAATGGAACAATACCAACAGCTCTTGAAGACTTGGTGCAGTTGTCAATGTTGAATCTCTCACACAATATGCTTTCAGGAACCATTCCTCAAAATTTTGAAAGGAATTTGGTTTTTGTTAATATATCAGACAACCAGTTAGAAGGCCCACTTCCTAAAATTCCAGCTTTTCTTCTTGCTCCGTTTGAATCATTAAAAAATAACAAAGGCTTATGTGGAAATATCACAGGTTTGGTTCCTTGTCCAACAAACAATAGTCGAAAGAGAAAAAATGTCATTCGATCGGTATTCATTGCTTTAGGAGCTCTAATATTAGTGTTGTGTGGTGTTGGAATTTCTATTTATATTTTGTGTCGAAGAAAACCACGAAAGGAAAAAAGCCAAACGGAAGAAAAAGCACAAAGGGGAGTACTATTTTCAAATTGGAGTCATGATGGGAAAATGACGTTTGAAAGTATTATTCAAGCTACTGAGAATTTTGATGACAAATATCTCATTGGAGTTGGAAGTCAAGGAAATGTTTATAAGGCAGAGTTGTCCAGCGGTTCGGTTGGTGGCATCTATGCTGTGAAGAAGCTTCATTTAGTAACAGATGATGAAATGTCAAAGTCTTTTACGAGTGAGATTGAAACATTGAGAGGAATCAAACACAGGAACATCATCAACCTTCAAGGATATTGCCAGCATTCTAAGTTCTCATTTTTGGTTTACAACTTCATGGAAGGTGGAAGCTTAGATCAAATACTAAACAATGAAAAACAAGCCATTGCATTTGATTGGGAAAAGAGGGTGAATGTTGTTAAAGGTGTCGCCAATGCTTTGTCCTACTTGCATCACGATTGCTCACCTCCTATTGTTCATCGTGATATATCGAGTAAAAATGTTCTTATCAATCTTGACTATGAAGCTCATGTCTCTGACTTCGGGATCGCTAAGTTTCTAAAGCCTGATGAAACTAATCGGACCCAATTTGCAGGAACTCTAGGGTATGCAGCTCCAGAGTTGGCACAAACAATGAAAGTGAATGAGAAATGTGATGTATACAGTTTTGGAGTACTTGCTTTGGAAATCATAAAGGGAGAACATCCTGGAGATCTCATTTCATTATATTTGTCACCATCTACAAGGCCATTGGCTAATGATACATTATTGACAGATGTTTTAGATGAAAGACCTCAAAAAGTTATGAAACCAATTGATGAGGAGGTTATCTTGATTGCAAAGTTGGCATTTGCTTGCATAAATCCAGAGCCACGTTCTCGTCCAACCATGGATCAGGTATGTAAGATGCTTGGAGCAGGAAAATCACCTTTGGAAGATCAACTTCACACGATCAAACTAGGACAACTTCTTCATTAA 3183 0.3622 MALSTFIMILFIILFTSWPQAVAQDSEAKSALLKWKNSFDNQSQALLPTWKNTTNPCRWQGIHCDKSNSITTINLKSFGLKGTLHSLTFSSFTNLTTLNIYDNNFYGTIPPQIGNISKINSLNFSLNPIDGSIPQEMFTLKSLQNIDFLYCKLSGAIPNSIGNLTNLLYLDLGGNNFFGTPIPPEIGKLNKLWFLSIQKTNLIGSIPKEIGFLTNLTYIDLSNNLLSGVIPETMGNMSKLNLLILANNTKVSGPIPHSLWNMSSLNMILLYNMSLSGSIPESVENLINVNDLALDSNRLSGTIPSTIGNLKNLQYLNLGFNRFSGSIPDSIGNLTNLAVLSLQANNLTGTIPATIGNLKQLIVLELSTNKLHGRIPNELNNNTNWYSFLVSENDFVGHLPSQICSGGKLTFLNANNNRFTGPIPTSLKNCSSIQRIRIQANQIEGDIAQVFGVYPILQYFEASDNKFHGQISPNWGKCLNIENFKISNNNISGAIPLELTRLTKLGRLHLSSNQLTGKLPKELGRMASLMELKISNNHFSENIPTEIGSLQSLGELDLGGNELSGTIPKEVAELPRLRMLNLSRNKIEGSIPSLFGSALESLDLSGNLFNGTIPTALEDLVQLSMLNLSHNMLSGTIPQNFERNLVFVNISDNQLEGPLPKIPAFLLAPFESLKNNKGLCGNITGLVPCPTNNSRKRKNVIRSVFIALGALILVLCGVGISIYILCRRKPRKEKSQTEEKAQRGVLFSNWSHDGKMTFESIIQATENFDDKYLIGVGSQGNVYKAELSSGSVGGIYAVKKLHLVTDDEMSKSFTSEIETLRGIKHRNIINLQGYCQHSKFSFLVYNFMEGGSLDQILNNEKQAIAFDWEKRVNVVKGVANALSYLHHDCSPPIVHRDISSKNVLINLDYEAHVSDFGIAKFLKPDETNRTQFAGTLGYAAPELAQTMKVNEKCDVYSFGVLALEIIKGEHPGDLISLYLSPSTRPLANDTLLTDVLDERPQKVMKPIDEEVILIAKLAFACINPEPRSRPTMDQVCKMLGAGKSPLEDQLHTIKLGQLLH 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02340 1060 FunFam Leucine-rich repeat receptor protein kinase EMS1 184 279 - -
Mepo3g02340 1060 Gene3D Phosphorylase Kinase; domain 1 728 847 - -
Mepo3g02340 1060 PRINTS Leucine-rich repeat signature 620 633 - -
Mepo3g02340 1060 PRINTS Leucine-rich repeat signature 216 229 - -
Mepo3g02340 1060 SUPERFAMILY RNI-like 73 381 - -
Mepo3g02340 1060 FunFam Leucine-rich repeat receptor protein kinase MSP1 731 847 - -
Mepo3g02340 1060 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Mepo3g02340 1060 Gene3D Ribonuclease Inhibitor 408 698 IPR032675 -
Mepo3g02340 1060 Pfam Protein kinase domain 770 1037 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02340 1060 SUPERFAMILY RNI-like 340 662 - -
Mepo3g02340 1060 Pfam Leucine rich repeat 288 347 IPR001611 GO:0005515
Mepo3g02340 1060 Pfam Leucine rich repeat 528 587 IPR001611 GO:0005515
Mepo3g02340 1060 ProSitePatterns Tyrosine protein kinases specific active-site signature. 893 905 IPR008266 GO:0004672|GO:0006468
Mepo3g02340 1060 Gene3D Ribonuclease Inhibitor 181 236 IPR032675 -
Mepo3g02340 1060 FunFam Piriformospora indica-insensitive protein 2 280 373 - -
Mepo3g02340 1060 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 382 693 - -
Mepo3g02340 1060 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 441 1039 - -
Mepo3g02340 1060 ProSiteProfiles Protein kinase domain profile. 768 1047 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02340 1060 FunFam Nuclear pore complex protein NUP107 24 183 - -
Mepo3g02340 1060 SUPERFAMILY Protein kinase-like (PK-like) 750 1039 IPR011009 -
Mepo3g02340 1060 Gene3D Ribonuclease Inhibitor 237 407 IPR032675 -
Mepo3g02340 1060 ProSiteProfiles Leucine-rich repeat profile. 576 598 IPR001611 GO:0005515
Mepo3g02340 1060 Gene3D Transferase(Phosphotransferase) domain 1 848 1053 - -
Mepo3g02340 1060 Gene3D Ribonuclease Inhibitor 25 180 IPR032675 -
Mepo3g02340 1060 FunFam MDIS1-interacting receptor like kinase 2 848 1045 - -
Mepo3g02340 1060 SMART LRR_typ_2 550 573 IPR003591 -
Mepo3g02340 1060 SMART LRR_typ_2 620 644 IPR003591 -
Mepo3g02340 1060 SMART LRR_typ_2 213 236 IPR003591 -
Mepo3g02340 1060 SMART LRR_typ_2 92 116 IPR003591 -
Mepo3g02340 1060 SMART LRR_typ_2 358 382 IPR003591 -
Mepo3g02340 1060 SMART LRR_typ_2 310 334 IPR003591 -
Mepo3g02340 1060 SMART LRR_typ_2 502 526 IPR003591 -
Mepo3g02340 1060 SMART LRR_typ_2 164 189 IPR003591 -
Mepo3g02340 1060 SMART LRR_typ_2 574 597 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02340 Mepo-Chr3 33162634 33165950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02340 7 941 Receptor kinase-like Gene Family AT4G08850 41.361 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo3g02340 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02340 - - gmx:100815688 1308.89