Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02325 ATGGCAACATCACCACCACCATCATCACCAACTGAATCGATCCCATCATCACCTCCATCCGCAGTACCTCTCCCTCTCTCCCTCCCAGCACCACCACCACCAACCTCATCTCGCCGTCTTCCACCACCGTGCTGGACCCCAGAAGAAACCTCTGCTCTGATCGATTCCTACCGTGACAAATGGTACTCTCTCGGTCGAACGAATCTCAAAGCAACCCATTGGCAAGAAGTTGCTGATGCCGTCGCTGTTCGTTGCCCTAACGCTTCACCCGTCGCCAAAACCGCCGTTCAGTGTCGTCACAAAATGGAAAAACTCCGTAAACGTTACCGATCTGAGATTCAGAAGCTTAGATCTCTTCCGGTTCCGAGATCTCGTTCTTCTTCTTCGTGGGTTCTCTTCAAAGCTATGGATTCTATGGAAAAGGGTCCTTCTCCACCTTCTCCACCGCATAAACCAGAAAACCCTAATCATAACGCTAATCATAATCATATCCATAGCCATAACCTTATTACCCACCGCGAAACACTAGATAACGATGATTATGATGATGATGATCTTTATGAGGAACTTAGAAGCGCTGCTGGTGGTGGTTCTGGTTCTGGTAATACCAGAAGTCTTGATAAGCTTTACCGAAATGGAGTTTCCGGTGGTTCGGGTGGTTTTGGTGGTTCCGGTAGTGGGTTTCGGATTAGGATTCCAACTGGTGTTAGTGTCGCGCAACCCGGATCAAAATTCTATCCGAAAATGAACAATTCAGAATCTGGGTCTAGGATCAATGGTGGAACAAGGCTTGTCAAGGAGAGGGTTGTGTTGGGGAAGAGAGAGAGGGAGAGAGAGGTTGAGAGAGAAAGGGAAAGAGATCCAATTGGTGAAATGGTGAATGCTATCAAGGTTTTGAGAGATGGGTTTGTGAGGATGGAACAGATGAAGATGGAGATGGCTAGAGAGATTGAAACTATGAGGATGGAGATGGAAATGAAGCGGACTGAGATGATTTTGGAGTCTCAGCAGAGGATTGTTGAGGCTTTTGCGAAAGCGGTTTCGGAGAAGAACAAGAAGAGGAAACTACGTAAGGGTAATAGTATCAACAACGACAACAACATCATTAACAACAACAACGACAATCACAATAACAATATAGCTTCACCCTCAGAATCGTAG 1161 0.4643 MATSPPPSSPTESIPSSPPSAVPLPLSLPAPPPPTSSRRLPPPCWTPEETSALIDSYRDKWYSLGRTNLKATHWQEVADAVAVRCPNASPVAKTAVQCRHKMEKLRKRYRSEIQKLRSLPVPRSRSSSSWVLFKAMDSMEKGPSPPSPPHKPENPNHNANHNHIHSHNLITHRETLDNDDYDDDDLYEELRSAAGGGSGSGNTRSLDKLYRNGVSGGSGGFGGSGSGFRIRIPTGVSVAQPGSKFYPKMNNSESGSRINGGTRLVKERVVLGKREREREVERERERDPIGEMVNAIKVLRDGFVRMEQMKMEMAREIETMRMEMEMKRTEMILESQQRIVEAFAKAVSEKNKKRKLRKGNSINNDNNIINNNNDNHNNNIASPSES 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02325 386 MobiDBLite consensus disorder prediction 361 386 - -
Mepo3g02325 386 Coils Coil 99 119 - -
Mepo3g02325 386 Pfam Myb/SANT-like DNA-binding domain 43 139 IPR044822 -
Mepo3g02325 386 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 13 349 IPR044823 -
Mepo3g02325 386 MobiDBLite consensus disorder prediction 138 163 - -
Mepo3g02325 386 FunFam Trihelix transcription factor ASIL2 45 111 - -
Mepo3g02325 386 MobiDBLite consensus disorder prediction 1 45 - -
Mepo3g02325 386 Gene3D - 45 111 - -
Mepo3g02325 386 MobiDBLite consensus disorder prediction 350 386 - -
Mepo3g02325 386 MobiDBLite consensus disorder prediction 1 41 - -
Mepo3g02325 386 SMART 118neu2 52 144 IPR006578 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02325 Mepo-Chr3 32913654 32915598 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02325 44 139 Trihelix Transcription Factor Family AT3G14180 33.333 3.82e-14 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mepo3g02325 Myb_DNA-bind_4 2.9e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02325 - - mtr:11426900 483.026