Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02315 ATGGCCGGCATAGACTTGGGTTCAGCATCACAACACTTTGTTCATCGCCTTCAACGTCCTGACCTAGAAGTTCATGATGAGAGTCAAGACCAAGATGGAAACAACAACAACCATGAAGGGCTTGACCTAGTTTCACCAAATCATGGTCTTGGTGATGTCGTTGGTCGCAGGCCGAGGGGAAGACCTCCGGGCTCAAAGAACAAACCTAAACCACCGGTGATCATCACAAGAGAGAGTGCAAACACACTTAGGGCTCACATCCTTGAAGTAAGTAGTGGTTGTGATGTGTTTGACTCTGTGGCTACCTATGCAAGGAAGCGTCAAAGAGGGATCTGTGTTCTTAGTGGGAGTGGAACTGTCACTAACGTGACCCTGCGACAGCCAGCTGCCGCAGGATCTGTAGTGACTTTACATGGAAGATTTGAAATACTTTCTTTGTCCGGATCGTTTCTTCCACCACCAGCTCCTCCAGGAGCTACAAGTTTGAGTGTGTTCCTTGGTGGAGGCCAAGGTCAAGTTGTGGGAGGAAATGTTGTTGGTCCTTTGGTTGCTTCTGGACCGGTTATTGTCATCGCTTCATCTTTTACGAATGTAGCGTATGAGAGGTTACCGTTGGATGAAGATGAATCTCTTCAGATGCAACAAGGGCAATCATCTGCAGGTGGTGGTGGCGGTGGCGGTGATGGTGTCAATAACTCTTTTCCTGATCCATCGTCGGGGTTACCGTTCTTTAATTTGCCTCTAAATATGCCTCAATTACCAGTGGATGGTTGGGCTGGAAACTCTGGTGGAAGACAATCTTATTGA 807 0.4783 MAGIDLGSASQHFVHRLQRPDLEVHDESQDQDGNNNNHEGLDLVSPNHGLGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVSSGCDVFDSVATYARKRQRGICVLSGSGTVTNVTLRQPAAAGSVVTLHGRFEILSLSGSFLPPPAPPGATSLSVFLGGGQGQVVGGNVVGPLVASGPVIVIASSFTNVAYERLPLDEDESLQMQQGQSSAGGGGGGGDGVNNSFPDPSSGLPFFNLPLNMPQLPVDGWAGNSGGRQSY 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02315 268 ProSiteProfiles PPC domain profile profile. 80 217 IPR005175 -
Mepo3g02315 268 Pfam Plants and Prokaryotes Conserved (PCC) domain 84 197 IPR005175 -
Mepo3g02315 268 FunFam AT-hook motif nuclear-localized protein 83 210 - -
Mepo3g02315 268 MobiDBLite consensus disorder prediction 24 73 - -
Mepo3g02315 268 CDD DUF296 84 166 IPR005175 -
Mepo3g02315 268 SUPERFAMILY AF0104/ALDC/Ptd012-like 80 211 - -
Mepo3g02315 268 MobiDBLite consensus disorder prediction 209 246 - -
Mepo3g02315 268 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 29 221 IPR014476 GO:0003680
Mepo3g02315 268 Gene3D - 83 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02315 Mepo-Chr3 32804402 32805630 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02315 1 265 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 63.816 1.81e-101 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02315 - - gmx:100803960 416.387