Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02313 ATGCAAACCTTGTTCTTGTTCTTGTTCTTGTCCTTTTTGTTTATCATCTTCTTAGAAGGATCTCATTCTCATAAGCTAGCTTCCATCAAGTCAAAACCTTTTATCTTTCTCAACAACTATAGAAGAATCCTTCATGAACCCTTTGTGCCATTGAACTCTCTCCCTCCATCTGAACCACCACAATCACCTCCACAACCACCACCATCACCACCACCACTTCATTCTCCACCTTCAACCAAAAACACCAAACACCCATTTTCCACCACTATTCCCACAGATAACAACCCAACTCAAGATCAAAACCAAAATCAAAACCAAAACCCAAACCAAGACCCAAACCAAAACCAATCACCATTTTTCCCAAACTACCCTCTTTCACCACCCCCACCACCACCTTCACTACTTGCCTTTGCTTCATTTCCTGCTAACATCTCCTCCCTAATTCTTCCTCACACCCCCCAACCAACTACTCACTCTTCTAACAAACTCCTCCCTATAGCACTCTCCGCTACTGCCGTGGCAGTCGTCGCTGTTGTCATCTCCGTCTTCCTTTACTTCCGCCGACGACTCCATAACCGTCGTACTTCCACCGGCGACAAGACTCTAAGATCCGACAGCAGCGTCGAGCTTTTCTCGCGCAATGCCGAACCCGCCGTCGATGTCGGAGGAAACACCACCGATTTTCTCTACCTTGGCACCGTTGTTAACTCGCGTGGAATCGATGAAACTCCTCCTTCTCGCGGCGGTGGTTCGGTTTATCGTAAACTTGAATCGCCGGAGCTCCGGCCTCTTCCACCGTTGGCGCGGCTTCCCGAACCTCCATCACCGCCGCTGCGTGGCGACAACTACTCCGACGAGGAAGATGAGGAGTTTTACTCGCCGAGAGGCTCCTCTCTCGGTGGACGAGAAAGCTCCGGTGGTACCGAATCATCTTCCCGGCGAGCATTCTCCGCCGTTGTCGTTAACAGAAGCAGCAAATCAAGCTCAATTTCTTGTTCTTCTTCTTCTTTTGGCTCGCCGGAGCAGTCTCATTCGATGAGTCTCTCACCGCCGGCGAGTTCTAGTCCCCGGAGAACACAACAAAAATCACCAGAAACCTCACCAAGTCACAACCAACACGTGGAATATCGTTCTTCTTCATCATCGTTCTCTTCATCACGTTCAACACCAGAGAGAGATTTTGATGAAGAAAAAGAAAATGCTTCTTTATCCACAAATGCACATGCATCATTAGAAGAGAGATTTATGGAGAAAAATGAAAATGGTTCTTTATCAGAACAAGCACAAAGACTATCTAATGTTTCATCTTCAGCTTTTTCACTTCCTTCTTCACCTGAGAAAATGATGAAGATGATGTATCAAGGTTTTGATCAGTCTCCAAGAATGTCAAGTGTTTCTGACGGTTCAAAGCTACCTGGTATGTCATCGGTGCCTCTGTCACCAGCCCTACTTTCATCACCAGAAACCGAAAGAGGAGGGTTTAGCTGTAATTCAAACCAATGGGGAACATTTTCTTCACAGAGGAAGCATTGGGAGATTCCAGTTATATCGAAGCAGATTGCTTCTCCACCACCGCCACCTCCTCCTCTGCCGCAGCAGCGACAGAGGAGACATTGGGAAATGTCTAGAAGTTCGGCGATTGTTTATCAACCTCGGTCAAATTTGAGGCCACCGGAGTTAGCACCTCCTTCGAGGCCTTTTGTGTTGCAGAATCAAATGACAAATGAGTGTGTGGGGGAAACCGAAGAGAGTTCGAAACCGAAATTGAAGCCACTGCATTGGGATAAAGTGAGAACCAGCTCTGAGCGGGAAATGGTGTGGGATCAGATGAATTCTATGTCTTTTAAATTGAATGAGGAAATGATTGAGACATTGTTTGTAGTGAAAACAGCAAACCAAAAACCCAAGGATGCTGCTCCGCGATCTGTTCTTCCCCTGCCAAATCAGGAGGGCAGAGTACTTGATCCAAAGAAATCTCAAAATATTGCAATCTTGCTCAAGGCTCTTAATGTCACAATAGAAGGAGTGTGTGAAGCACTTTTAGAAGGTAGTAGTGATACACTTGGAGCAGAGCTTCTTGAAAGCTTGTTAAAAATGGCACCAAGCAAGGAAGAAGAGCGTAAATTGAAGGAACATAAAGATGACTCACCGACCAAGCTTGATGTTGCTGAGAAATTTTTGAAGGCATTGCTTGATATACCTTTTGCATTTAAAAGGGTCGAAGCAATGCTTTACATGGTCAATTTTCAATCTGAAGTAGGCTATCTTAGAAAATCATTTCAAACTCTAGAGGTTGCGTGTGAAGAGCTGCGGTATTGTAGAATGTTCTTGAAGCTTTTAGAAGCTGTACTTAAAACTGGGAACCGCATGAATATTGGAACAAATCGCGGTGATGCGGAGGCTTTCAAACTCGATACACTTCTCAAGTTGGCTGATGTCAAAGGAGCAGATGGGAAAACCACTTTACTACATTTTGTCGTACAGGAAATTATTAGAACGGAAGGCGTTCGTCTCTCTGGTACTAATCAAACAACAAGCTCTACTTTGGTGGAAGATGTCAAGTGTTGGAGGCTTGGCCTACAAGTTGTTTCTAATCTGAGTTCAGACCTATCAAATGTAAAGAGAGCTGCTACAATGGATTCCGAAGTTCTCAGCAGTGATGTCTTAAAACTTTCCAAAGGAACGACAAACTTAGCAGAGGTCGTGCAGTTAATCGAAAAAGCGGGATTTGATGAAAGCAGTCAGAAATTTACAGAATCAATGAACAACTTCATTAGAATGGCTGAGGAGGAAATTGTGACAATTCAAGCACACGAAAGTGTTGCTTTGACCCTTGTGAAAGAGATTACAGAATATTTTCATGGGAACTTGGCAAAAGAAGAAGCTCATCCATTCAGAATCTTCTTGGTTGTAAGAGATTTTTTAGCTGTTCTTGACAGGGTCTGCAAAGAAGTTGGTATGGTAAACGAGCGAACCACGGTTAGTTCAGCTAATAAATTCCCTGTTCCAGTTAATCCAATGCTTCCACAACCACTTCCTGGATTACATGGAAGGAAGGATTGTAGTAACTCTTCAGATGATGAATTTTCATCACCTTAG 3099 0.4427 MQTLFLFLFLSFLFIIFLEGSHSHKLASIKSKPFIFLNNYRRILHEPFVPLNSLPPSEPPQSPPQPPPSPPPLHSPPSTKNTKHPFSTTIPTDNNPTQDQNQNQNQNPNQDPNQNQSPFFPNYPLSPPPPPPSLLAFASFPANISSLILPHTPQPTTHSSNKLLPIALSATAVAVVAVVISVFLYFRRRLHNRRTSTGDKTLRSDSSVELFSRNAEPAVDVGGNTTDFLYLGTVVNSRGIDETPPSRGGGSVYRKLESPELRPLPPLARLPEPPSPPLRGDNYSDEEDEEFYSPRGSSLGGRESSGGTESSSRRAFSAVVVNRSSKSSSISCSSSSFGSPEQSHSMSLSPPASSSPRRTQQKSPETSPSHNQHVEYRSSSSSFSSSRSTPERDFDEEKENASLSTNAHASLEERFMEKNENGSLSEQAQRLSNVSSSAFSLPSSPEKMMKMMYQGFDQSPRMSSVSDGSKLPGMSSVPLSPALLSSPETERGGFSCNSNQWGTFSSQRKHWEIPVISKQIASPPPPPPPLPQQRQRRHWEMSRSSAIVYQPRSNLRPPELAPPSRPFVLQNQMTNECVGETEESSKPKLKPLHWDKVRTSSEREMVWDQMNSMSFKLNEEMIETLFVVKTANQKPKDAAPRSVLPLPNQEGRVLDPKKSQNIAILLKALNVTIEGVCEALLEGSSDTLGAELLESLLKMAPSKEEERKLKEHKDDSPTKLDVAEKFLKALLDIPFAFKRVEAMLYMVNFQSEVGYLRKSFQTLEVACEELRYCRMFLKLLEAVLKTGNRMNIGTNRGDAEAFKLDTLLKLADVKGADGKTTLLHFVVQEIIRTEGVRLSGTNQTTSSTLVEDVKCWRLGLQVVSNLSSDLSNVKRAATMDSEVLSSDVLKLSKGTTNLAEVVQLIEKAGFDESSQKFTESMNNFIRMAEEEIVTIQAHESVALTLVKEITEYFHGNLAKEEAHPFRIFLVVRDFLAVLDRVCKEVGMVNERTTVSSANKFPVPVNPMLPQPLPGLHGRKDCSNSSDDEFSSP 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02313 1032 MobiDBLite consensus disorder prediction 1009 1032 - -
Mepo3g02313 1032 MobiDBLite consensus disorder prediction 519 533 - -
Mepo3g02313 1032 MobiDBLite consensus disorder prediction 239 313 - -
Mepo3g02313 1032 MobiDBLite consensus disorder prediction 421 443 - -
Mepo3g02313 1032 MobiDBLite consensus disorder prediction 298 313 - -
Mepo3g02313 1032 MobiDBLite consensus disorder prediction 518 541 - -
Mepo3g02313 1032 MobiDBLite consensus disorder prediction 458 483 - -
Mepo3g02313 1032 Gene3D Formin, FH2 domain 576 988 IPR042201 -
Mepo3g02313 1032 MobiDBLite consensus disorder prediction 327 443 - -
Mepo3g02313 1032 PANTHER FORMIN-RELATED 130 1026 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Mepo3g02313 1032 Pfam Formin Homology 2 Domain 582 978 IPR015425 -
Mepo3g02313 1032 MobiDBLite consensus disorder prediction 79 120 - -
Mepo3g02313 1032 SUPERFAMILY Formin homology 2 domain (FH2 domain) 523 989 - -
Mepo3g02313 1032 ProSiteProfiles Formin homology-2 (FH2) domain profile. 579 1004 IPR015425 -
Mepo3g02313 1032 MobiDBLite consensus disorder prediction 264 278 - -
Mepo3g02313 1032 MobiDBLite consensus disorder prediction 52 78 - -
Mepo3g02313 1032 SMART it6_source 579 993 IPR015425 -
Mepo3g02313 1032 MobiDBLite consensus disorder prediction 458 499 - -
Mepo3g02313 1032 MobiDBLite consensus disorder prediction 51 126 - -
Mepo3g02313 1032 MobiDBLite consensus disorder prediction 327 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02313 Mepo-Chr3 32757518 32761545 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02313 115 303 FH2 protein (formin) Gene Family AT3G25500 42.788 1.36e-19 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02313 - - gmx:100801837 968.763