Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02306 ATGGTTTTGTGTAGCAGAATTTTCAGTACTCCTATTATTGTTAGTTTCTCACTGCTAGTTATTAGTTGTGGCATTACCTACGGTACTGAGACTGACATCTTATGCTTAAAAAGGGTAAAAGAATCACTTAAAGACCCAAACAATTATTTGCAAAATTGGGATTTCAACAACAAAACTGAAGGGTCTATCTGCAAGTTCACTGGTGTTGAATGTTGGCATCCTGATGAAAATAGGGTTTTGAATCTCAAACTTTCTAATATGGGACTTAAGGGCGAGTTTCCTCGTGGTATTCAAAACTGCTCGAGCTTAACTGGATTAGATTTTTCGTTGAACAGCCTCTCTAAAACAATTCCGGCCGATGTATCTACCCTTATTGCCTTTGTGACCAATCTTGATCTATCTTCAAATGATTTCACCGGAGAGATCCCCGACTCACTTGCTAATTGTACCTATCTTAATAGTCTTAAACTTGACCAGAACCAACTCACCGGTCAAATTCCTCCAGAATTTGCTGGACTCAATCGGCTTAAGACGTTTATTGTTTCTAACAATCTTTTGTCAGGACAAGTTCCAAATTTTAGACAAGGTATAGTTACGGCAGATAGTTTTGTGAATAATTCGGGACTCTGCGGACCTCCTTTAGAGCGTTGCAAGAGTAAGTCTTCGAAGACTAACACTGCAGTTATAGCTGGAGCAGCTGTTGGTGGTGTGACTCTTGCAGCATTAGGAGTGGGCGTTGGATTGCTCTTCTTTGTACGCAGTGTTTCTCACAGGAAAAAGGAAGAAGATCCTGAAGGAAATAAATGGGCAAGAATTCTTAAGGGAACCAAGAAAATAAAGGTGTCAATGTTTGAGAAGTCAATTTCAAAAATGAACTTGAGTGATCTCATGAAGGCTACTAATAACTTCAGTAAAAGCAATGTTATTGGGACTGGAAGATCTGGAACTGTTTACAAAGCTGTCCTTGACGATGGCACGTCACTCATGGTTAAGAGATTACTGGAATCTCAACACTCGGAGCAAGAATTTATGGCTGAGATGGCCACACTAGGAACAGTGCGACATCGTAACTTGGTTCCTCTTTTAGGTTTTTGCCTGGCCAAAAAGGAGAGGCTTTTGGTCTATAAAAATATGCCAAATGGTACTCTTCATGACAAACTACACCCTGATGCCGGCGACTGCACTATGGAGTGGTCTGTAAGGCTCAAAATCGCAATTGGAGCAGCTAAAGGATTTGCATGGCTTCATCACAACTGCAATCCTCGTATCATCCACCGAAACATAAGCTCAAAGTGCATTTTGTTGGATGTAGATTTCGAGCCCAAAATTTCTGATTTTGGCCTTGCAAGATTGATGAACCCAATCGATACCCATTTGAGTACTTTTGTAAATGGTGAGTTTGGCGATCTAGGTTATGTTGCTCCTGAGTATACAACAACTTTGGTGGCTACACCTAAAGGGGATGTTTATAGCTTCGGAACTGTGCTTCTCGAGTTGGTAACCGGTGAAAGACCTACACATATAGCGAAAGCTCCAGAAACTTTTAAAGGAAATTTGGTAGAATGGATTATGCAGCTCTCAGTCAACTCTAAATTAAAAGACGCCATTGATGAATCACTAGTTGGAAAAGGCGTTGATCATGAACTTTTTCAGTTTCTAAAGATTGCATGTAACTGTGTTTCATCAACTCCAAAGGAGAGGCCTACTATGTTTGAAGTATACCAGTTTCTAAGAGACATTGGGAGTAGATATAATTTCATAACTGAGGATGAGATAATGATACTTACAGATAATGGTGATGCTGGTAAGTTGGAAGAACTTATCGTAGCGCGAGAGGGACATAGTTGA 1848 0.4021 MVLCSRIFSTPIIVSFSLLVISCGITYGTETDILCLKRVKESLKDPNNYLQNWDFNNKTEGSICKFTGVECWHPDENRVLNLKLSNMGLKGEFPRGIQNCSSLTGLDFSLNSLSKTIPADVSTLIAFVTNLDLSSNDFTGEIPDSLANCTYLNSLKLDQNQLTGQIPPEFAGLNRLKTFIVSNNLLSGQVPNFRQGIVTADSFVNNSGLCGPPLERCKSKSSKTNTAVIAGAAVGGVTLAALGVGVGLLFFVRSVSHRKKEEDPEGNKWARILKGTKKIKVSMFEKSISKMNLSDLMKATNNFSKSNVIGTGRSGTVYKAVLDDGTSLMVKRLLESQHSEQEFMAEMATLGTVRHRNLVPLLGFCLAKKERLLVYKNMPNGTLHDKLHPDAGDCTMEWSVRLKIAIGAAKGFAWLHHNCNPRIIHRNISSKCILLDVDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTTTLVATPKGDVYSFGTVLLELVTGERPTHIAKAPETFKGNLVEWIMQLSVNSKLKDAIDESLVGKGVDHELFQFLKIACNCVSSTPKERPTMFEVYQFLRDIGSRYNFITEDEIMILTDNGDAGKLEELIVAREGHS 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02306 615 Gene3D Ribonuclease Inhibitor 26 92 IPR032675 -
Mepo3g02306 615 Gene3D Ribonuclease Inhibitor 93 226 IPR032675 -
Mepo3g02306 615 SUPERFAMILY Protein kinase-like (PK-like) 280 577 IPR011009 -
Mepo3g02306 615 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 48 193 - -
Mepo3g02306 615 CDD STKc_IRAK 309 580 - -
Mepo3g02306 615 Gene3D Phosphorylase Kinase; domain 1 264 376 - -
Mepo3g02306 615 ProSiteProfiles Protein kinase domain profile. 303 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02306 615 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 264 377 - -
Mepo3g02306 615 Gene3D Transferase(Phosphotransferase) domain 1 378 597 - -
Mepo3g02306 615 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Mepo3g02306 615 Pfam Leucine rich repeat N-terminal domain 31 72 IPR013210 -
Mepo3g02306 615 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 378 590 - -
Mepo3g02306 615 SUPERFAMILY L domain-like 30 199 - -
Mepo3g02306 615 FunFam Nuclear pore complex protein NUP107 29 192 - -
Mepo3g02306 615 Pfam Protein tyrosine and serine/threonine kinase 306 577 IPR001245 GO:0004672|GO:0006468
Mepo3g02306 615 Pfam Leucine rich repeat 129 186 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02306 Mepo-Chr3 32695043 32698543 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02306 18 591 Receptor kinase-like Gene Family AT3G28450 45.769 1.18e-178 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Mepo3g02306 PK_Tyr_Ser-Thr 1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02306 - - gmx:100817267 951.814