Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02303 ATGGAGGATTCACTGGAGAATTTGATTTCTTATATGGAAATGGAAGATGATGAAATTTTGAATCAAAGTAGCACCACTACATTTGATCAGCAAGAGTTTCTCAAAGATATCATTCTTGAAGAACCAGAATGTGAACCCTCTTCTTATCTTTGTTCCAATAAAACCCAAGACAATAGTACAACTATAATAAATGTTGAAGGTGATGCCACTAGCCCCACAAATAGTATTTTGTCCTTTGATGAGACAAGTTTATTTTGTGGTTATGAGAATGTTGAAACAAACCACAAAAGTAATAATAGCTCCAACTCAATCAAGTCTTTGGAAAGATCTTGTGTTTCTTCTCCAACCACATACCTTCTATCTTTTGATAACTCCAGTATTGAACCAATCATTGAACCAATGTCACATAAAACTAAGAGAAAGAGTACTATAGGGACAGATGAATCAAGGGGGGTGAAGGAAGCAACAAAGAAGGTAAGAAGATCATGTGAGACAGTACAAGATCACTTAATGGCTGAGAGGAAAAGGAGAAGGGAATTAACAGAGAATATCATTGCACTTTCAGCCATGATACCTGGCTTGAAAAAGATGGACAAGTGTTATGTACTTAGTGAAGCTGTGAATTACACAAAACAACTTCAAAAGCGCATTAAAGAATTGGAGAATCAAAAGAAAGATAACAAAGCAAATCCAGCAATATTCAAGTGGAAATCTCAAGTTTCATCAAATAAAAAGAAATCCTCAGAATCACTTCTTGAGGTTGAAGCTAGAGTCAAAGAAAAGGAAGTACTCATCAGAATTCATTGTGAGCAGCAAAAGGACATGGTACTCAAAATACATGAATTGCTTGAAAAGTTCAATCTCACTATAACAAGTAGTACCATGTTACCATTTGGTGCTTCTATTCTTGTTATCAACATTGTTGCTCAGATGGATGAAGAAGACAGCATGACCATGGATGGCCTTGTGGAAAATCTGAGAAAATATCTATTGGAGGCACATGAGAGTCAATTGTGA 1017 0.3569 MEDSLENLISYMEMEDDEILNQSSTTTFDQQEFLKDIILEEPECEPSSYLCSNKTQDNSTTIINVEGDATSPTNSILSFDETSLFCGYENVETNHKSNNSSNSIKSLERSCVSSPTTYLLSFDNSSIEPIIEPMSHKTKRKSTIGTDESRGVKEATKKVRRSCETVQDHLMAERKRRRELTENIIALSAMIPGLKKMDKCYVLSEAVNYTKQLQKRIKELENQKKDNKANPAIFKWKSQVSSNKKKSSESLLEVEARVKEKEVLIRIHCEQQKDMVLKIHELLEKFNLTITSSTMLPFGASILVINIVAQMDEEDSMTMDGLVENLRKYLLEAHESQL 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02303 338 PANTHER BHLH TRANSCRIPTION FACTOR 5 332 - -
Mepo3g02303 338 SMART finulus 170 219 IPR011598 GO:0046983
Mepo3g02303 338 Coils Coil 203 230 - -
Mepo3g02303 338 Gene3D - 164 233 IPR036638 GO:0046983
Mepo3g02303 338 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 169 228 IPR036638 GO:0046983
Mepo3g02303 338 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 164 213 IPR011598 GO:0046983
Mepo3g02303 338 MobiDBLite consensus disorder prediction 135 160 - -
Mepo3g02303 338 Pfam Helix-loop-helix DNA-binding domain 168 214 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02303 Mepo-Chr3 32682968 32685958 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02303 90 330 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 36.538 1.73e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo3g02303 HLH 3.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02303 - - tpra:123888201 419.468