Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02289 ATGGTATATGCCACAAGGTGTGTAAAGCTTCCTGCTTTTCACAAACATGGCTACATGAAGCTGAAAACAAATAGAGCCATGTTCTTCTTCCTCCACCGCCATTTTTCCACCTCCACAAAAACCAACCTCCCAAACCTCTCCAAAATCCCCATCAAACACAGAAACCATGTCATTCACCAAGCTCAAAAAGCCCTCACCGATTACCTCCACAACACCAAATCCATACCCTTCACCTATGCAGAACACATCGGCAACAACGCTCTCTGTTCCCTCACAAATCTCATTTCAAAGGTAAATTTTTCACCACCCACTTTCTCAAATAACATTAAAAGAGTCATTAGGTTCCACACCATTAACGAATTTGAAGTCTTTTTTGAAAGCATAGGGATAGATTATACTTTGGTTTCTGATTTGTTACCGAATGATAAGCTGTTCTTTTCAGAGGATAGGACCCTTTTGGAAGCTGCTTGTGTGCTTTGTGATTTTGGGTTTCCTTGGGAGAAGTTAGGTGTGTTGTATATGGAGAAGAGTTCTATATTTGGGAAAAGTGTTGAAGAGTTGAAACTGAGGCTTTGTTGGTTTAAAAGATTTGGTTTTGGTAATGTTGAAGTTATTGGGATTTGTTTGGCTTTTCCTTTTGTTTTGAGTGAGGAAGTGGGTCAAATTCAAAAGGGTGTTTTTGGGATTGATGGGTTGTTTAGTGATCTAAAGTTGATTTTTTTGGATAATTCTTTGGGAAGTTATGTTGATGGAAATGTAGGTTCATGGTATGAGGTGTGTAGAAAGTTGCGACTGTTTTACGATTTAAGTGGATGGAAGGGTAATGTAGGAGAACTCATGGGGAAGAATAAGAGTATATTTGTTGATCACAAAGAAGATGAGATAGTACACAGATTAGAGTATTTCTGTAGATTTGGTGGAAAGAAGGAGGAAGTCGCTTTGTTGATTCTACAATGTCCTGAAGTGTTGAAGCTTGATTTGGAGAAGACGGTGATTAATGTGTTGGAGCTGTTGAAACACTTTGGCATGAGCTCTAAAGATTTGGAGGATGTTATTGAAAATTTTGGTCATGTGTTGGGAACAATTAGAATGGTTAATCTACCAAATGTGATAAGAGCTATGGGTTTGCAAGAATGCTTCTGTGATAAGTTAAAGGGTGGACATTATCGGTTGTTAGCGGATTATATCACAAGCGATCGTAATGAAGTCCGGGATAAAGATTATCAAGATGGTTTGAGGAGAATTCACATTTCACGAGCTCGAGTTCATAGCATTAATAAGTTGAATTTCTTACATAGGTTAGGCTTTGGAGAAAATGCATTGACTATGAATCTTTTGGATCGTTTGCACGGCACAAGCAGTGAGTTACAGGAAAGATTTGACTGCCTTCTACGCTCAAGAATTGAATTCTCAAAGCTCTGCATGATGGTAAGAAAAACCCCAAGGATTCTGAACCAAAATTATGAAATTATAGAGCAAAAAGTGAATTTTTTCAACCAGGAAATGGGAACAACTTTGGACTGTCTGGAAACTTTTCCAGCAATGTTGCATTATCACTTGGATGACCGAATTATACCTAGGTACAGATTCCATACGTGGCTTACAGAAAGGGGTCTGTCTTATAGAAAATATTCCATTCAAAGTATGATCACTGATAGCGAAAAGAAATTTGTAGCCCGAGTGTTTAAAATTCATCCAGCTGCTCCAAAACATTGGTTCGAGCAATTCTCTCGCCGTCAATTGCCAATGTAA 1752 0.3841 MVYATRCVKLPAFHKHGYMKLKTNRAMFFFLHRHFSTSTKTNLPNLSKIPIKHRNHVIHQAQKALTDYLHNTKSIPFTYAEHIGNNALCSLTNLISKVNFSPPTFSNNIKRVIRFHTINEFEVFFESIGIDYTLVSDLLPNDKLFFSEDRTLLEAACVLCDFGFPWEKLGVLYMEKSSIFGKSVEELKLRLCWFKRFGFGNVEVIGICLAFPFVLSEEVGQIQKGVFGIDGLFSDLKLIFLDNSLGSYVDGNVGSWYEVCRKLRLFYDLSGWKGNVGELMGKNKSIFVDHKEDEIVHRLEYFCRFGGKKEEVALLILQCPEVLKLDLEKTVINVLELLKHFGMSSKDLEDVIENFGHVLGTIRMVNLPNVIRAMGLQECFCDKLKGGHYRLLADYITSDRNEVRDKDYQDGLRRIHISRARVHSINKLNFLHRLGFGENALTMNLLDRLHGTSSELQERFDCLLRSRIEFSKLCMMVRKTPRILNQNYEIIEQKVNFFNQEMGTTLDCLETFPAMLHYHLDDRIIPRYRFHTWLTERGLSYRKYSIQSMITDSEKKFVARVFKIHPAAPKHWFEQFSRRQLPM 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02289 583 Gene3D Transcription termination factor 3, mitochondrial 415 579 IPR038538 -
Mepo3g02289 583 Gene3D Transcription termination factor 3, mitochondrial 104 239 IPR038538 -
Mepo3g02289 583 Gene3D Transcription termination factor 3, mitochondrial 258 383 IPR038538 -
Mepo3g02289 583 Pfam mTERF 454 557 IPR003690 GO:0003690|GO:0006355
Mepo3g02289 583 Pfam mTERF 275 360 IPR003690 GO:0003690|GO:0006355
Mepo3g02289 583 PANTHER CGI-12 PROTEIN-RELATED 60 564 IPR003690 GO:0003690|GO:0006355
Mepo3g02289 583 SMART mt_12 474 505 IPR003690 GO:0003690|GO:0006355
Mepo3g02289 583 SMART mt_12 170 200 IPR003690 GO:0003690|GO:0006355
Mepo3g02289 583 SMART mt_12 506 540 IPR003690 GO:0003690|GO:0006355
Mepo3g02289 583 SMART mt_12 313 344 IPR003690 GO:0003690|GO:0006355
Mepo3g02289 583 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02289 Mepo-Chr3 32594153 32596070 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mepo3g02289 mTERF 3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02289 - - lja:Lj1g3v2862750.1 650.973