Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02261 ATGAACAAGTTACTAGTAGTACCACTCTGCATGCTTTTGTTGGTTCTCTTTGTTGAAGCTGCCCCTCAAGGATCTCTCATCACACAACTCCCTGGTTTTTCCGGAAAATTCCTCTCCAACCATTACTCAGGATATATAAGTATTGAAGGAAATGCTCAGAGTGGGAAGAATCTGTTCTACTACTTTGTTAGTTCAGAAAGAAATCCAAGTAAGGATCCAGTTGTTCTATGGCTCAATGGTGGACCTGGTTGTTCAAGCTTCGATGGCTTTGTTTATGAACATGGGCCATTCAACTTTGAGGCTGCAAAATCAAAAGGGAACCTGCCCACTTTGCATAACAATCCTTACAGCTGGTCGAAGGTTTCCAACATTATATATTTGGATTCACCAACGGGAGTTGGCTTCTCTTACTCAAATAACATTAGCAAATACATAACTGGGGACCTACAAACTGCTTATGATACTCATGCTTTCCTCTTAAAGTGGTTTGAGCAATTTCCAGAATTTCAAGCTAATCCATTTTATGTTTCTGGGGAGTCTTATGCTGGAATTTACGTACCCACTCTAGCTTTTGAAATTGCTAAAGGAATCCAGAGTCGTGCAACGCCCGTGATCAATTTGAAGGGTTACATGGTGGGAAATGGTGTCACAGACCCAATATTTGACGGCGATGCCTATGCTTTTATCCCATTTGTGCATGGGATGGGTCTTATATCCGACACTATGTATGAGAACGTGCAAGCTACTTGCAAAGGACCCGATTACAATTCTAAATCTAATCCTGTGGGTGGTACATGCAATAAGAACTTGGACAAAGTTGGTAAGGCCGTTCAGGGGCTTAATGTGTACAATATATTAGAGCCATGCTACCATGATCCTGAAAGTGCTACAAATGGAAGCTCTAACTTGCCATTAAGTTTCCAAAAATTAGGGGCAACAGAGAGACCTCTCTCAGTGAGAAAAAGGATGTTTGGTAGAGCTTGGCCTTTTAGAGCACCAGTCAGAGATGGCCTTGTTACCTTATGGCCTCAATTAATGGCTGCCCAAAGGAGACATGTCCCTTGTGTTAATGATGAAGTAGCAACCACGTGGCTAAACAACGATGCAGTCAGGAAAGCCATTCATGTTGATAAGGCAAGTGGTGCGTGGCAATTATGCACTGATAGGATAAGTTTTCGACACGATGCTGGTGGCATGATTCCTTACCACAAGAATCTAACAAGATTGGGTTATCGAGCACTTATTTTCAGTGGAGATCATGATATGTGTGTACCATTTACTGGAAGTGAGGCATGGACCAGATCTTTGGGATATAGGGTTGTGGATGAATGGAGGTCATGGATCTCTAATGACCAAGTTGCTGGGTACTTACAAGCATATGAGAACAATCTTACCTTCCTAACAGTAAAGGGATCTGGGCACACAGTACCGGAATATAAGCCACGGGAGGCACTTGATTTTTACAGTCGTTGGTTGGAAGGAAAATCAATTTAA 1494 0.4224 MNKLLVVPLCMLLLVLFVEAAPQGSLITQLPGFSGKFLSNHYSGYISIEGNAQSGKNLFYYFVSSERNPSKDPVVLWLNGGPGCSSFDGFVYEHGPFNFEAAKSKGNLPTLHNNPYSWSKVSNIIYLDSPTGVGFSYSNNISKYITGDLQTAYDTHAFLLKWFEQFPEFQANPFYVSGESYAGIYVPTLAFEIAKGIQSRATPVINLKGYMVGNGVTDPIFDGDAYAFIPFVHGMGLISDTMYENVQATCKGPDYNSKSNPVGGTCNKNLDKVGKAVQGLNVYNILEPCYHDPESATNGSSNLPLSFQKLGATERPLSVRKRMFGRAWPFRAPVRDGLVTLWPQLMAAQRRHVPCVNDEVATTWLNNDAVRKAIHVDKASGAWQLCTDRISFRHDAGGMIPYHKNLTRLGYRALIFSGDHDMCVPFTGSEAWTRSLGYRVVDEWRSWISNDQVAGYLQAYENNLTFLTVKGSGHTVPEYKPREALDFYSRWLEGKSI 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02261 497 SUPERFAMILY alpha/beta-Hydrolases 27 495 IPR029058 -
Mepo3g02261 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 464 477 IPR001563 GO:0004185|GO:0006508
Mepo3g02261 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Mepo3g02261 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Mepo3g02261 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Mepo3g02261 497 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
Mepo3g02261 497 FunFam Carboxypeptidase 354 496 - -
Mepo3g02261 497 Gene3D alpha/beta hydrolase 20 320 IPR029058 -
Mepo3g02261 497 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 27 481 IPR001563 GO:0004185|GO:0006508
Mepo3g02261 497 Gene3D - 352 497 - -
Mepo3g02261 497 FunFam Carboxypeptidase 20 310 - -
Mepo3g02261 497 Pfam Serine carboxypeptidase 31 494 IPR001563 GO:0004185|GO:0006508
Mepo3g02261 497 ProSitePatterns Serine carboxypeptidases, histidine active site. 464 481 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02261 Mepo-Chr3 32328130 32336530 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02261 360 497 Calmodulin-binding Proteins AT2G22960 47.482 1.44e-41 145